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berkeley_reactor_200306_planktonic_scaffold_204825_24

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(26736..27743)

Top 3 Functional Annotations

Value Algorithm Source
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 327.0
  • Bit_score: 481
  • Evalue 5.20e-133
rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase (EC:5.1.3.20) similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 329.0
  • Bit_score: 445
  • Evalue 8.30e-123
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9R8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 327.0
  • Bit_score: 481
  • Evalue 3.70e-133

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1008
ATGAAACCGAACGATTTCTCCGACGCGCGCGTCCTCGTCACCGGCGGGGCGGGCTTCATTGGCAGTGCGCTGGTCTGGGCGCTGAACCGGCGCGGGTGCGACAACATCGTTGTCAGTGACATCCTCGGCACGAACGAAAAATGGCGCAATCTCACGCCGTTGCGTTTTGCCGATTACGTCGAGGCGGATGAATTACTGCCGCGATTGCAAAGCGGCGCGCTGGGAAAATTCGATTTAATCCTGCACATGGGCGCGTGCTCGGCCACGACGGAAAAAGACGCGACGTATCTCATCCGCAACAATTACGAATTCACCCGCGATCTTTCGCTATGGTCGCTGGCGCACAAAACGCGGTTTGTTTATGCGTCGTCCGCCGCGACTTACGGCGACGGCTCGGCGGGCATGGAGGACGATGATTCCAAGCTCGACGCGTTGCGCCCGTTGAACATGTATGGCTACTCGAAACACTTGTTCGATCAGCATGCCAAGCGCGCCGGTTTCCTGAACAAAATTTGCGGCCTGAAGTTTTTCAACGTCTTCGGCCCGAACGAAGATCACAAGGGCGACATGCGGTCGCTGGTTCACAAAAGTTTCGCGCAGGTGCAGAGCAAGGGCGTTATCCAGTTGTTCAAGAGCTATCGCAAGGATTACAAGCACGGCGAGCAGAAGCGCGATTTCCTTTACGTCAAAGATTGCGTGGCAATGACGCTGCACCTGGCGGCGACATCCAAGGCAAATGGCTTGTTCAACATCGGCAGCGGCGGGGCGCGTTCCTGGATTGATCTGGCCAACGCGGTTTTCGGCGCGTTGAAAAAAAAGCCCGTCATCAAGTTCATCGAGATGCCGGAAACCATTCGCGACAAATACCAGTATTTCACCCAGGCCAATTTGCTGCGGTTGCGCGGCGCGGGCTACGCGGCACCGGTCACCAGCCTGGAGCGCGCGGTGGCCGATTATGTCCGCAACTATCTGGTGCCGGACAAGCGGCTGGATCCGGCGGTGGAATAA
PROTEIN sequence
Length: 336
MKPNDFSDARVLVTGGAGFIGSALVWALNRRGCDNIVVSDILGTNEKWRNLTPLRFADYVEADELLPRLQSGALGKFDLILHMGACSATTEKDATYLIRNNYEFTRDLSLWSLAHKTRFVYASSAATYGDGSAGMEDDDSKLDALRPLNMYGYSKHLFDQHAKRAGFLNKICGLKFFNVFGPNEDHKGDMRSLVHKSFAQVQSKGVIQLFKSYRKDYKHGEQKRDFLYVKDCVAMTLHLAATSKANGLFNIGSGGARSWIDLANAVFGALKKKPVIKFIEMPETIRDKYQYFTQANLLRLRGAGYAAPVTSLERAVADYVRNYLVPDKRLDPAVE*