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berkeley_reactor_200306_planktonic_scaffold_204825_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(30269..31282)

Top 3 Functional Annotations

Value Algorithm Source
homospermidine synthase (EC:2.5.1.45) similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 324.0
  • Bit_score: 566
  • Evalue 4.20e-159
Homospermidine synthase (Spermidine-specific) {ECO:0000313|EMBL:ADY60227.1}; EC=2.5.1.45 {ECO:0000313|EMBL:ADY60227.1};; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 324.0
  • Bit_score: 566
  • Evalue 2.10e-158
Homospermidine synthase (Spermidine-specific) n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SR06_PLABD similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 324.0
  • Bit_score: 566
  • Evalue 1.50e-158

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Taxonomy

Rubinisphaera brasiliensis → Rubinisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1014
ATGGCCAAGAAAAAGCAGATCAAACCCGCAAAACTCACCGGCGGCCCCGTTTCCCGTTTCATCCAACATCACTATCGCCACTTCAACGCCGCGTCGCTCGTGGACGCCGCCAAAGGCTACGTCGCCCATCTGGATAAAGGCGGCAAAATGATGATCACGCTCGGCGGCGCGATGAGCACGGCGGAACTCGGCCTGTCGCTCGCCGAAATGATCCGCCAGGACAAGGTGCATCTCATCACCTGCACCGGCGCGAATTTGGAGGAAGACGTGTTTAATCTTGTCGCCCACGATTACTACGAGCGCGTGCCGCACTATCGCATGTTGAGCGCCGAGGACGAACAGGCATTGCTTGAACGTCACATGAACCGTGTCACCGACACCTGCATTCCCGAAGGCGAAGCCATGCGCCGCATGGAAAAGGCGATGCTCGAAGTCTGGACCGATGCCGACAAGAAAGGCGAACGCTATTTCCCGCACGAATTTTTCTACAAGGTGTTGCTCAGCGGCAAATACGAAAAGTATTATCAGATTGATCCGAAAAATTCCTGGATGCTGGCCGCCGCCAAGAAGAATTTGCCCATCGTCGTTCCGGGTTGGGAAGACGCCACGCTCGGCAACATGTATGCCGCCGCCGTCATTCGCGGCGACGTGAAAAACGTTCACACCGTCCGCACCGGCATTGAATACATGACCTGGCTCGCCGAGTTTTACACCAAGACCGCGACCAAGAAGAGCACCATCGGCATGTTCCAGATTGGCGGCGGCATTTCCGGCGATTTCCCGATTTGCGTCGTTCCGATGCTGCACCAGGATTTGGAACGCACCGGGGTTCCGCTCTGGGGGTATTTCTGCCAGATCAGCGATTCCACGACGAGCTACGGCAGCTATTCCGGCGCCGTGCCGAACGAGAAAATCACCTGGGGCAAACTCGGCGTGAAGACGCCGAAATTCATCGTTGAATCCGACGCCACGATCGTTGCGCCGCTGATTTTCGCGCACGTTCTCGGCTGGTAA
PROTEIN sequence
Length: 338
MAKKKQIKPAKLTGGPVSRFIQHHYRHFNAASLVDAAKGYVAHLDKGGKMMITLGGAMSTAELGLSLAEMIRQDKVHLITCTGANLEEDVFNLVAHDYYERVPHYRMLSAEDEQALLERHMNRVTDTCIPEGEAMRRMEKAMLEVWTDADKKGERYFPHEFFYKVLLSGKYEKYYQIDPKNSWMLAAAKKNLPIVVPGWEDATLGNMYAAAVIRGDVKNVHTVRTGIEYMTWLAEFYTKTATKKSTIGMFQIGGGISGDFPICVVPMLHQDLERTGVPLWGYFCQISDSTTSYGSYSGAVPNEKITWGKLGVKTPKFIVESDATIVAPLIFAHVLGW*