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berkeley_reactor_200306_planktonic_scaffold_204825_67

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 73424..74305

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulator yisR n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GK63_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 286.0
  • Bit_score: 185
  • Evalue 6.20e-44
Putative HTH-type transcriptional regulator yisR {ECO:0000313|EMBL:CCH54288.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 286.0
  • Bit_score: 185
  • Evalue 8.80e-44
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 295.0
  • Bit_score: 183
  • Evalue 8.80e-44

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
ATGTCCGAATTAAACCAGGAATTACTGACGGGATTGGAATTCAAAGTGCTGGCCGTTCAACGCACGGCGGCGGGGCGTTGGTGGAATTTCAAAAATGTGATTAGTCCTTTTTCGCGATTATGGCTGATTTTGGGAGGGCGAGCCCAGGTCCGGCATCATGGCCGTGAATTCATTTTGAAACCGGGAGGCCTGCATCTGGTGCCGCCGTTTACGGCGCATGATTGTTTCTGCGCGAGCCGGCTGGACCATTACCATCTCCATTTTGTATCGCGACTACCGGCCGGAGTGGATCTGTTTTCGCTGTTGGACTGCGCGTTTCAACTGCCGGCATCACCGGAGACGCACCCATATTTTCAACGGCTGGAAGCCCTGCATCCAGATCGAAAACTGCCGTGCTATGATCCGAGGCGCGATGAATACCGGAGCTTCCCCATTTCCAGCGAATTCGAGCGGCCGCACTTGTCCACCGCCAGTTGGTTTGAGACGAATGGCTTGCTGACGCTCCTGCTTGCGCCATTTTTAAAGACCGCCCAGGTGCATGAAGGTGTTCATGCCCGGGTGACCCGCCAGTTTCTGGCCGTGCAGGAATTCATACATAAGCATATTCGCGAACTGATTTTACTGGGCGACCTGGCCCGTGCGGCCAATCTGCACCCGACCTATTTTTCCGACCGGTTTCAAAAGCTCGTGGGGATTCGTCCGCTTGAATATTTGATGCGCTACCGGTTGGAGCGCGCCCAGTTTCTGCTATTAACCAGCCGGGCGCCGATCAAACAGGTGGCGTATGAAGTCGGCATCCCGGATCCGGCCTATTTCACCCGTGCCTTCAGCCGGTTCTGGCGGGTTTCCCCGACCGAATATCGGAAGCTGAACAGTTCCTGA
PROTEIN sequence
Length: 294
MSELNQELLTGLEFKVLAVQRTAAGRWWNFKNVISPFSRLWLILGGRAQVRHHGREFILKPGGLHLVPPFTAHDCFCASRLDHYHLHFVSRLPAGVDLFSLLDCAFQLPASPETHPYFQRLEALHPDRKLPCYDPRRDEYRSFPISSEFERPHLSTASWFETNGLLTLLLAPFLKTAQVHEGVHARVTRQFLAVQEFIHKHIRELILLGDLARAANLHPTYFSDRFQKLVGIRPLEYLMRYRLERAQFLLLTSRAPIKQVAYEVGIPDPAYFTRAFSRFWRVSPTEYRKLNSS*