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berkeley_reactor_200306_planktonic_scaffold_204825_70

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 78582..79226

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q230_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 215.0
  • Bit_score: 262
  • Evalue 2.90e-67
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCM78435.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 215.0
  • Bit_score: 262
  • Evalue 4.10e-67
LuxR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 211.0
  • Bit_score: 256
  • Evalue 5.90e-66

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Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGAGCAGCTTTAGCCGTCCGCGTATTCTGCTGGCCGACGACCATCGCATGGTGGCCGAGGGCCTCAAGAGCCTGCTGTGCCAGGATTTCGAACTGGTGGGCGTGGTGGAAGACGGCCGCGCTTTGATCGAGACGGCGCGGAAGGAACATCCGGACGTCATCGTGGCGGATATTTCCATGCCGCATTTGAACGGACTCGACGCGCTCGATGTTTTGAAAAAGCGCAATCCCGATGTAAAGATGGTCTTCCTGACGATGCACCGCGACGCCGCCTACGCGCGGCGCGCGATGGAGGCGGGCGCGTCCGGTTTTGTTTTGAAACATTCCGCGCCGGCGGAACTGGTGCTGGCCATCCGGGCGGCGCTGGCGGGCAAAACCTTTCTGACCGCGTCCCTTGCCGGAGAGGTGCTGCAATCCATGCACGCAGGCGGCGAACCGGACGAAGCCGCGCGGTTGACGCCGCGGCAGCGGGAAATTTTGCAACTGCTGGCGGAAGGTTGCTCCGCCAAGGAAGTGGCGGCGCAATTGGGTATCTCGACCCGCACGGTGGAATTCCACAAGTATCACATGATGGAGACGCTCAAGCTGCACAACAGCACCGAACTCGTCCACTTCGCCATCAAGCACGGCATCGTCAGCATCTGA
PROTEIN sequence
Length: 215
MSSFSRPRILLADDHRMVAEGLKSLLCQDFELVGVVEDGRALIETARKEHPDVIVADISMPHLNGLDALDVLKKRNPDVKMVFLTMHRDAAYARRAMEAGASGFVLKHSAPAELVLAIRAALAGKTFLTASLAGEVLQSMHAGGEPDEAARLTPRQREILQLLAEGCSAKEVAAQLGISTRTVEFHKYHMMETLKLHNSTELVHFAIKHGIVSI*