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berkeley_reactor_200306_planktonic_scaffold_207894_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 4171..5826

Top 3 Functional Annotations

Value Algorithm Source
Excinuclease ABC C subunit domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGZ6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 548.0
  • Bit_score: 727
  • Evalue 6.30e-207
UvrABC system protein C {ECO:0000256|SAAS:SAAS00125834}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 548.0
  • Bit_score: 727
  • Evalue 8.90e-207
excinuclease ABC C subunit domain protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 517.0
  • Bit_score: 397
  • Evalue 3.30e-108

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1656
ATGGCCGCGTCGGAACACATTCGCAAAAAACTCGGCACCGTGCCGCACAAGCCGGGCGTTTACCTGCACAAGGACCGCTTCGGCAAGGTGATCTACGTGGGCAAGGCGCGGGATTTGCGCAAGCGCGTCAGCCAGTATTTTCATCCGGGCCGGCGGCTGGGCTGGGATTTGAAATTCAACGCGCTCGTCGAGGCGATTCACGATTTCGATGTGCATGTGGTCAAAAGCGAACCCGAGGCGCTGCTGCTGGAAAGCAAGTTGATCAAGGATTTCAAACCGCGTTTCAATGTGAGCCTGCGCGATGACAAGCGCTTCCTGATGCTCAAGGTGAACTTGAACGATCCGATTCCGAACTTCACCTTCACGCGGCTGAAGAAGGACGATGGCGCGCGTTACTTCGGTCCGTTCGTGAATTCCACCGCGCTGCGCAACACGCTGGCGCTGGCGCGGAAGCAGTTCAATTTGCGCGGCTGCCGCGTGTTCACCCCGGGCGAGGCGGATTACCGCCATTGTCTCTACGCGCATCTCAAAAACTGCACCGCGCCGTGCGTCGGCAATGTCACCCGCGAACAGTATCTGCAACAGGTGGCCGCCGCGTGCCAGTTCCTCGAAGGCCAGTGCCGCGAAATGCAGGACCAGCTCACGGCGGAAATGAAAAAAGCCGCCGCCGCGCACGAGTTTGAAAAGGCCGCCGAACTGCGCGATCTCATCCGCGATTTGCAGGACACCTGGAAACGCACGGAAAAATTCGAGCGCATTCCCTACACGCTGCCGCTGGCCATCAATCCCGGGCGCGACCTGTATGAACTCGGCAAAGTGCTGGGCCTGCCGAAACCGCCGGAGCGCATCGAAGGGTTTGACATCTCCAACATCAGCGGCACCTTCGTCGTGGCGTCGTGCGTGAGTTTCAAAAACGGCCGGCCGGATCGCGCGAATTACCGGCGCTTTAAAATCAAGGGCTTTGAGGGACAGGACGATTTCGCGAGCATGGCCGAAGTGGTGCGCCGGCGGTATTCACGGCTGAAACGCGAAGCCGAAACCATCCCGGCTCCCGCCCAAAAAAACCACGACGAGGACAGTGGTGAAGCGATCGCGCAGGAGTTGCAGCCGCTTGTGGCTGAAACCAGCCGCCAATTCCGGCGCGGCGGGCCGGCCCAAAGCGATCGCGCCGCCGCCGTTGCTGGTCCGCTGCCATTTCCCGACCTGATTCTGATAGACGGCGGACGTGGTCAGTTGGGCATGGCCTGCGCGGAATTGAAAAAGCTGGGGCTGGAAGCAATTCCGGTCATCGGGCTGGCCAAGGAATTTGAAGAAATTTATGTGCCGGACAAAGCCGAGCCGTTGCGGTTGGGATTGGATCATCCCGCGGTGAAATTATTACAACGCGTGCGCGATGAATGTCATCGCGTGGCGAACAGTTTCAACGCGCAGCTTCGGCTCAAGAAAATTTCCGAAAGCATCCTGGACGAATTCCCCGGCATCGGGGAACGCCGCAAACAGGCTTTGTTGAAAAAGTTCGGCTCCGTCCAGCGGCTGAAGCTGGCGACGCTGGAACAGATTGCCGAAGTGCCGGGCTTCGGCGGCAAGGCGGCGGCGGAACTGAAGGAATTTCTGGCGGCGCGGGGAGGCGTCGGCGTTCCGGCGGAACCGGCTTGA
PROTEIN sequence
Length: 552
MAASEHIRKKLGTVPHKPGVYLHKDRFGKVIYVGKARDLRKRVSQYFHPGRRLGWDLKFNALVEAIHDFDVHVVKSEPEALLLESKLIKDFKPRFNVSLRDDKRFLMLKVNLNDPIPNFTFTRLKKDDGARYFGPFVNSTALRNTLALARKQFNLRGCRVFTPGEADYRHCLYAHLKNCTAPCVGNVTREQYLQQVAAACQFLEGQCREMQDQLTAEMKKAAAAHEFEKAAELRDLIRDLQDTWKRTEKFERIPYTLPLAINPGRDLYELGKVLGLPKPPERIEGFDISNISGTFVVASCVSFKNGRPDRANYRRFKIKGFEGQDDFASMAEVVRRRYSRLKREAETIPAPAQKNHDEDSGEAIAQELQPLVAETSRQFRRGGPAQSDRAAAVAGPLPFPDLILIDGGRGQLGMACAELKKLGLEAIPVIGLAKEFEEIYVPDKAEPLRLGLDHPAVKLLQRVRDECHRVANSFNAQLRLKKISESILDEFPGIGERRKQALLKKFGSVQRLKLATLEQIAEVPGFGGKAAAELKEFLAARGGVGVPAEPA*