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berkeley_reactor_200306_planktonic_scaffold_207894_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 12468..13505

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK44_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 342.0
  • Bit_score: 496
  • Evalue 1.50e-137
Radical SAM domain protein {ECO:0000313|EMBL:EEF59867.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 342.0
  • Bit_score: 496
  • Evalue 2.10e-137
DNA repair photolyase similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 346.0
  • Bit_score: 453
  • Evalue 4.10e-125

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1038
ATGGACAATCCGACCAACCGGTTTGAGAAAATTCATCTCGAACCGGACGAGGACTGGAATCCGGAGTTGGACGAAGATGGCCGTTCACAAGGGCGCCGCACGCAGTTCTTCAAGGACCACAGCAAAACGATCATCGCCCGCAACGACAGTCCGGATGTGGGGTTTGATGCGAGTTTGAATCCATATCGCGGATGCGAGCATGGTTGCATTTATTGTTACGCCCGGCCAACGCATGAATTTCTCGGTTTTTCCGCCGGACTCGATTTTGAGAGCAAAATCATGGTGAAGCAGGATGCGCCGGATTTGTTGCGCAAAGAGCTGTCGTCGCGGAAATGGCAACCGCAGACAATTTTCCTGAGTGGGGTCACCGATTGCTATCAACCGGTGGAGCGCAAGTTGAAACTAACGCGGCGCTGCCTGGAAGTGCTGGCGGAATTTCGGAATCCGGTTTTTATCATCACGAAGAATCATCTGGTAACGCGCGACATTGATCTGCTGTCCGAACTGGCGCGGCATAAGGCGGCGGCTGTCTGGCTTTCCATTACCACACTGGATTTGGAACTGCGCAAGCTCATGGAACCGCGCACCTCGCCGCCGGCGGCACGCCTGGCGACCTTGCGTGAATTGTCGGCGGCCGGGATTCCGGTCGGCGTGAATGTGGCGCCGGTAATTCCCGGGCTGACAGATCACGAAATGCCGGCCATTCTCAAAGCCGCAGCGGAAGCCGGCGCGAAATCCGCCGGCTACACACTGGTGCGGCTGCCTTACGGCGTCGCGCCGCTGTTTGAAAAATGGCTGGCAACCCATTTCCCCGATCGGAAGGAGAAGGTGTTGAACCGGCTGCGTTCGATCCGTGGCGGCAAGTTGAATGAGTCGCAATGGGGAAAACGTTTCAGCGGAGAAGGTCTTTTCGCGAACCAAATCGAACAAATGTTCGAGGTCGCGCGGCGCAAAGCAGGAATTCACAATGAAAACGTGGAGCTCTCCAAGGCGGCATTTCATCGGCCAGACGAACGGCAGTTGCCCTTGTTTGGTTAA
PROTEIN sequence
Length: 346
MDNPTNRFEKIHLEPDEDWNPELDEDGRSQGRRTQFFKDHSKTIIARNDSPDVGFDASLNPYRGCEHGCIYCYARPTHEFLGFSAGLDFESKIMVKQDAPDLLRKELSSRKWQPQTIFLSGVTDCYQPVERKLKLTRRCLEVLAEFRNPVFIITKNHLVTRDIDLLSELARHKAAAVWLSITTLDLELRKLMEPRTSPPAARLATLRELSAAGIPVGVNVAPVIPGLTDHEMPAILKAAAEAGAKSAGYTLVRLPYGVAPLFEKWLATHFPDRKEKVLNRLRSIRGGKLNESQWGKRFSGEGLFANQIEQMFEVARRKAGIHNENVELSKAAFHRPDERQLPLFG*