ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_207894_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(15354..15653)

Top 3 Functional Annotations

Value Algorithm Source
Stress responsive alpha-beta barrel domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMB6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 153
  • Evalue 6.80e-35
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:EEF58958.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 153
  • Evalue 9.50e-35
stress responsive protein similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 99.0
  • Bit_score: 77
  • Evalue 1.30e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 300
ATGTTTTCGCACATCGTCATTTTTTGGACCGATCCAGCCAGACCCGAAGCCGCCGACGAAGTCATCGCCGGTGCCAACAAGCTGCTCAAAGCCATTCCCGGCCTGACTCATTTCCACATCGGCAAAATGGTTGGCAGCCAGCGCCCCGTGGTGGATCAGACTTATCAGGTCGCGCTCAACACTGTTTTCACCAGCAAACAGGCACAGGATGCCTATCAGGTGCATCCGCAACATCTGGAATTCATCGCGCAATGCGTGAAACCGTTCGTGAAAAAGGTGTTGGTTTACGATTTTGAATGA
PROTEIN sequence
Length: 100
MFSHIVIFWTDPARPEAADEVIAGANKLLKAIPGLTHFHIGKMVGSQRPVVDQTYQVALNTVFTSKQAQDAYQVHPQHLEFIAQCVKPFVKKVLVYDFE*