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berkeley_reactor_200306_planktonic_scaffold_207894_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 24485..24805

Top 3 Functional Annotations

Value Algorithm Source
Transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIQ8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 105.0
  • Bit_score: 147
  • Evalue 5.20e-33
Transporter {ECO:0000313|EMBL:EIL99349.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 105.0
  • Bit_score: 147
  • Evalue 7.30e-33
SugE protein similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 105.0
  • Bit_score: 144
  • Evalue 1.60e-32

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGTCCTGGTTCTATCTCCTGCTCGCGGGCTTGCTGGAAATCGCCTGGGCCATCGGCCTGAAATACACCCACGGCTTCACCCGCTTGTGGCCCAGCGTGGGCACGGCGGCGGCGATGGCGGTGAGTTTCTTTCTCCTTTCGTTGTCCCTCAAGACGATTCCCATGGGAACGGCCTACGCGGTCTGGACGGGCATCGGCGCGGCGGGAACGGCCTTGTGCGGCATGATGATCTACGGCGAATCGCGGGAAGTGGGGCGCGTGCTCTGCCTCGTGATGATCGTCGCGGGCACGGTCGGCTTGAAATACTTTGCCTCGAAATGA
PROTEIN sequence
Length: 107
MSWFYLLLAGLLEIAWAIGLKYTHGFTRLWPSVGTAAAMAVSFFLLSLSLKTIPMGTAYAVWTGIGAAGTALCGMMIYGESREVGRVLCLVMIVAGTVGLKYFASK*