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berkeley_reactor_200306_planktonic_scaffold_207894_33

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(33232..33987)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS54_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 238.0
  • Bit_score: 378
  • Evalue 3.30e-102
ABC transporter related-protein {ECO:0000313|EMBL:EEF57309.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 238.0
  • Bit_score: 378
  • Evalue 4.60e-102
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 240.0
  • Bit_score: 253
  • Evalue 5.90e-65

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 756
ATGATCGAGTTGCATCATCTCGTCAAAAAATTCGGGGAGATCACTGCCGTAAACGACATTTCGCTGTCCATCCGGCGCGGCGAATTTTTCTCCATGCTGGGGCCGAATTCCGCCGGCAAAACCACCACCATCAAGATGATGACCGGGCTGATCAAGCCCACGTCCGGCTCCGCCAGCATCTGCGGGTTTGACGTTCAAACGCATCCGCTGGAAGCGCGGCGGCAACTGGCCTACGTCCCGGATTTTCCATTTCTCTACGACAAGCTGACCGGCTGGGAATTTTTTCGGTTCACCGGCCAACTGTTCCAGATCGAAGCCGCCCGGATTGAAAAAAACGCGCGCGAACTCGTGCGCCGCTTTCATCTGGCCGACTTCGTGGATCGTCCGCTCGAAGGATTGTCGCACGGCACGCGCCAGCGCGTCGCCATCGTTTCCGCGCTGCTGCATGATCCCGAGGTGCTGGTCATTGACGAGCCGATGGTCGGCCTCGACCCGCAACACGCCCGCGTGGTGAAGGACGTGTTGAAGGAGCGCTCCCTGGCCGGCATGACCGTGATGGTTTCCACGCATCAGTTGAGCATCGCTGAAGAAATGGCCGACCGCATCGGCATCATATCCAATGGCAAACTCATCGCCGTGGGTTCGCGTGAAGAATTGCGGCAACGGAGCGGAACGGCAAACGCCTTGGAAGAAATCTTTCTTTCCCTCACCGCCGGGGCCAATGGCGCCGCAGTGACCGGCAAAACGACCGGTTGA
PROTEIN sequence
Length: 252
MIELHHLVKKFGEITAVNDISLSIRRGEFFSMLGPNSAGKTTTIKMMTGLIKPTSGSASICGFDVQTHPLEARRQLAYVPDFPFLYDKLTGWEFFRFTGQLFQIEAARIEKNARELVRRFHLADFVDRPLEGLSHGTRQRVAIVSALLHDPEVLVIDEPMVGLDPQHARVVKDVLKERSLAGMTVMVSTHQLSIAEEMADRIGIISNGKLIAVGSREELRQRSGTANALEEIFLSLTAGANGAAVTGKTTG*