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berkeley_reactor_200306_planktonic_scaffold_220752_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 211..1698

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCZ0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 428.0
  • Bit_score: 418
  • Evalue 7.40e-114
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF61587.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 442.0
  • Bit_score: 434
  • Evalue 1.40e-118
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 244.0
  • Bit_score: 149
  • Evalue 1.80e-33

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1488
ATGCATGACCGCCGTGTGAAGAATAATGGCCAAATGAACTCAACCAGCTCGGGCAGGTCACCGCGGGCTCATTGGCTCTTGTCGTTGCGGGTTGGGATCGGTTTGGTATTGTCGGCTCTTGTTTTTTTTAAACATCCTGTCTTTGCCGCCGGAGCGCCGACACCAGAGAACAGGGAAGGCATTTCGGTTTCGCACCTGACCAATATTTCCAACGACGTGACCAACGGATTGGGCAGTTGGATTTGGGCAGACAAGACTTATGACCGGCAAACCTGCCGGCTTTGGAGGGGATTTGATATTCCGCATGGGGTCAAGGTGACTTCGGCCCGGATGAAAATGACGGCAGATGATGGTTATCAGTTTTTTCTTGATGGGCGCGCATTGGGGCAGGGAGCCAACTGGCACGGGTTGACGGAATACGACCTGGCCCGACTGTTGACTCCAGGCCATCACGTGCTGGCGGTGAATTGTTTCAACGACCTTTATCTCGCGGGGCTGATAATGGGGTTGCACATACAATTGAGTGATGGAAAAACCCTGGACATTCAATCGGATGCAAGCTGGCGCGTGGTTCCGAAGGAGACAAGCGGATGGGAAAGCCTGCTGCGCCCGCGTGCCGGGTGGCCTGCCGCAACCGTTGTTTCTGGTATTAACCGGGCATCTCCGCTGGCCGGCGGCCACTGGCCGGATGATTATATGAAAGTGCCTCCATTCGATCCCGTCTTTATTCCGTTCTGGCAGACTGGCTGGTTCCATTTGCTGGCGGCAATCGTTTCAGGAATGGTGTTTCTGGCATGCATCGTTTTATATTTGCAACTTGCCTTGCGGGCAAAGGAACAACGCCTGTTGGACTCGGAGCGTTCCCGCATTGCGCGCGATATTCACGATGATTTTGGCACCCGGCTGACCCGGCTGGTTCTCGAAAGCGAGGTGGCGCAAAATGAGACGGCAGAGGCAGAGAAATCGCGCCAGCGCTTGTCCCGCATTGGCGACGGACTTCGAGATGCCTTGGAGGTGATGGATGAAGTGCTTTGGGCAGTCAATCCGCGACGCGATACCGTGAGCGACTTTGTAACTTTCATCTGCGAACATGCCCAAAATTACCTGCAACCTGCCGGCATTGAATGCGTGCTCGATGTTGAACCCGACATGCCGCCGCTGGATTTCGATCTGCCCCTGCGCCGCAGTCTCCTGCTGGCAGTGAAGGAGGCGATTGCCAATGTGGCCAAACATTCCGGTGCCACGAAGCTGTTGCTTAAAATTCACCGGCAGAACTCCGGTCTGGCCGTCGTCGTTCAGGATAATGGCAAAGGCTTCAGTCCGGCGCAAAGTCGCGGTCAACGGAATGGCATCGGGAACATGATTCAACGCATGCGGGAAGTTGGCGGCCGGTGCGAGGTGAACAGCGCGCCCGGGAAGGGGTGCAGCGTGGAATTTAACCTTCCGCTGACGCGACGCCAACGGCTTGGGTGGTTGAATCCGCGCTGA
PROTEIN sequence
Length: 496
MHDRRVKNNGQMNSTSSGRSPRAHWLLSLRVGIGLVLSALVFFKHPVFAAGAPTPENREGISVSHLTNISNDVTNGLGSWIWADKTYDRQTCRLWRGFDIPHGVKVTSARMKMTADDGYQFFLDGRALGQGANWHGLTEYDLARLLTPGHHVLAVNCFNDLYLAGLIMGLHIQLSDGKTLDIQSDASWRVVPKETSGWESLLRPRAGWPAATVVSGINRASPLAGGHWPDDYMKVPPFDPVFIPFWQTGWFHLLAAIVSGMVFLACIVLYLQLALRAKEQRLLDSERSRIARDIHDDFGTRLTRLVLESEVAQNETAEAEKSRQRLSRIGDGLRDALEVMDEVLWAVNPRRDTVSDFVTFICEHAQNYLQPAGIECVLDVEPDMPPLDFDLPLRRSLLLAVKEAIANVAKHSGATKLLLKIHRQNSGLAVVVQDNGKGFSPAQSRGQRNGIGNMIQRMREVGGRCEVNSAPGKGCSVEFNLPLTRRQRLGWLNPR*