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berkeley_reactor_200306_planktonic_scaffold_220752_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 3602..8467

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Alpha-L-rhamnosidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ27_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 910.0
  • Bit_score: 600
  • Evalue 3.40e-168
Alpha-L-rhamnosidase {ECO:0000313|EMBL:EEF60065.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 910.0
  • Bit_score: 600
  • Evalue 4.80e-168
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 590.0
  • Bit_score: 503
  • Evalue 1.20e-139

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 4866
ATGCTGCTGGCGTTTGGAATCTTCCAAAGCCATGCCATTACCGTCACCAATCTTTGCTGTGAAGACCGCGACAATCCGCTCGGGATTGACGTTCTCCAGCCGCGGCTGGGCTGGACATTGGAATCATCGCAGCGCGGCGACACCCAGACGGCATATCAAATCCTGGCCGCGTCCAGCCAGTCGTTGTTGGACTCAGGCGTCGGCGATTTGTGGGATAGCGGCATGGTGGTGACCAACCGGCACATTCAAATACCTTACCAGGGCGCGGCGTTGCAAACCTCGCAGCCGGTGTTTTGGAAGGTGCGTTCCTGGGACGGAAGCAATGTGCCGTCAGCGTGGAGCGCCGACGCGACGTGGGCGATGGGCGTGCTCAATCCGGCCGATTGGCAGGCTCAATGGATCACGAGGCGACCGCGCCAATCCATTGGCTATCACGCGCAGACCAGCACCTCCCAAAATGTCACCAAATGGGTGCAGGTGGATTTGGGACAGGCTGACACCATCACCAACATCACGCTGCATCCGAAGTGGCATCAGGGTATTCCCGGCTATGGATTTCCAGTGCGCTTCCGCGTTGAGATTTCCAACGACCCGACGTTCGCCACGGCAACCACGATTACACATCAAACCAGTTCGGACTATCCCAACCCCGGCGATTTTCCCGTGTCCTTTCCCGTGGCGAACCTTTCCGCCCGCTATGTTCGCGTGACCGCGACCAAACTTTATTATTACGCAACGGACAATGATTACACCTTTGCCTTGAGCCAATTGGAGGTGCTGAGTGGCGGAACCAACGTCGCCTTGGATGCGTCGGTTTCCGCGTTCGACTCCATTGAACAAAATGGCTGGGGCAAAGCCGGCCTGACGGACGGCGCGGGATTTGTGGGTTGTGATTACGGACGGCGTCTGCGACGCGAGTTTTACGTTCAACCGGGATTGCGGCGTGCCGTTGTCCAGGTTTGCGGACTGGGGGAATATGAATTATTTGCCAACGGCAGCAAGGCGGGCAATGACCTCTTGTCGCCGGGCTGGTCTTATTACGGTCCCAGACCCTGGCAGGTGGGCACCAATCAAACCGTGCTCTACAACACGCGTGACATCACCGCGCAACTTCAGCCCGGCGCGACCAACGCCATCGGCCTGATTCTTGGCAACAGTTTTTACAACGTCACGCCCGGCTACGGGCGTTACGTCAAACCGGATTTTAATCAGAATCTGCCCTTTGGACCGCTGTGTGCCATTGTGCAGTTGCAACTGGATTACTCCAACGGCACGACGCAAATCATCGGCAGCGACACAAACTGGCAAACCGGTCCGGGCGCCATCACCTTCGAAAATGTCTATGCGGGCGAGGACTTCGACGCCCGGTTGGACCAGTTGCAGACCGGTTGGGATCAGCCGGGTTTCACAAATCCGGAATGGACGCCGGCGGCCCTGACCAACGGGCCGGGCGGAGTGCTGAAAGGATCGTCTTGTTCGGCTCCGCCAATTGAGAAATTCGACGTGTTCACGCCCATCGCCACCAATGTCATTTCCACTATAACGAACAATGCGGCAGGTGCGCAGATTATCAGTTGGAATGAGAATAATAGCGCATCAATTCCGCCAGCCGGCATTTCAGGTGTGGTGGCTTCGAATTGGAACAACTTGATCGCTGTCATCTCCTTGTATGACAACAACGGAGCAGCCACGACGGCGAGTTTTTCGATTTCCGGCTCGTGGGGTGCGTGGGGGATTGGCGCCTCCGGATATGGTAGTCCGGATGCTGACGGAACGTATAACCGAACCCTTCTGGGGGGATATGCCAACACTTCCTCCGGTGTCGGACCGGAAGTATTCTCCATTAGTGGCATTCCATACACGAATTACAACATCGTGGTTTACTTCAGTTCCGACACGGCTGGACGCAGTGGCACGATCAGCAGCGTTGATGCCGGAACCACGTATGATTTTACCACCATCGGTCCGGCATCGGTTAGTGGCAGCAATGCGGTTTTAAGCCAGACAACTGATACCACCGGCGCCAATCCTTCAGCGAATTATGCGGTGTTTGCCAACCTGGGCGGCAGCTCCGAGACGCTGACCTTGAACGTGCCACAGGGCGGCGGCATTGCGGGATTTCAGATCGTGGCGGCGGCTTCACAACCGAGCACACTGGTTTATGATTTGGGTCAGAACGCCACGCTGATGCCGGAATTGCAAGTCAGCGGGCCGGCGGGCTCGTATGTTCGAATCATTCCTTCGGAGCTTCTCGGAGCCAACGGTTTGGTGGACCGCACCACCTGCACGCAGGGCAGCAATCCGCCCCTGCCGGCCTGGTGGCAATACACTTTGAACGGAAGCGGCACTGAACGTTGGACACCGCAATTTTTCATTCACGGTTGCCGGTATCTTCAGGTGGAATTATATCCCGCCCCCGGCGGCGGCATGTTGCCGACAATTCAATCGTTGCAGGGAGTTGCGGTTCATTCCGCTTCGAAGCCCATCGGCACGTTCAGTTGTTCCAATCCGTTGTTCAACGAGATTTACAGCCTCGTTCGCTGGGCGCAGGTGAACAACATGGAAAGTTACCTGAGCGATTGTCCGCATCGCGAGCGCCTCGGCTGGCTGGAACAGGATTGGCTGAACGGCCCGTCGCTGCGTTACAATTTCAATCTCGCGCCGCTGTTCACCAAAATTGAAAACGACATTTTCGACAGCCAGTGGACCAACAACGGATTTGTGCCGAACATTGCGCCGGAATATTTTCAAACCAGCGGCAGCCTGACCGATCCTTTTCACAATTCGCCCGAATGGGGCAGCACCTTCATCCAAGGCGCATGGCAGCAATATGAATTTTCCGATGACGTTTCGTTGTTGCAACGATTCTATCCCGCGATGAAAAAATACCTGGGTTTTCTGACCGGTGAAGCCGGCACCAATTCCATCATTCCGGTGGATTTGGGCGATTGGTATGACCTGGGGCAATTGTCGGCGGGCGTTTTTTCGGGCACTTCACTGACTTCTAAATCACTTCCCGGCACGGCGACCTATTATGCGGATGCGGTGGTGATGGCGAAGATGGCGCAGGTCTTGGGCAATTCCGCCGATGCGACGTATTACAACCAGCTCGCGGCCGCCATTCGCGCCGGATTCAACGCCACCTATTTCAATCCGGCCAACGGCACGTATGACACTTCCAGCCAGACGGCCAACGGCATGCCGCTGGCGCTGGGCATGGTGAATTCGACCAACATCGCCAGCGTTAACGCCGCCCTCGTCAATGACATTCAGTCAAGAAACGATGCCTTGACGTCGGGCGAAATCGGCATCGGTTTTGTGTTTCGCGCGCTGGAACAGGCCGGGCGCAATGACGTGGTCAGCGCCATGCTCAATCAAACCGGCACGCCGGGCTATGGCTATCAGATTGCGCATGGCGCAACGAGCCTTGCAGAACGCTGGGACGCCGCCAATTCCAGCTTCAGTTCGCAGGATCATTTCATGTGCGGCGAAGTCATGGAATGGTTCTATCACGGTCTGGTCGGTATCCAACCTGATCCGTCCGGGCCGGGCTTCCAGAAAATCATCATCCATCCTGGCATCGGCAGTGGGCTGACTTTCGCGGCGGCAAGTTACAATTCTGCGAACGGGCTGATCACAAACCAGTGGACCGTGGACAACGATCTGGTCAGCATGAACATGTCCATTCCGCCCGGCTCGATCGCCACAGTTTATGTGCCGGTGCTGCAAACCAACCTGGCCGGTTTAACCATTCAAGAAAGCGGCGTAACGATTTGGACCAACGGAACAACAGCAGGCAGTTCGCCGGATGTTACCAATGCCGGAGTTGTGACGACCAACGGACAAAGCAGCGTGCTTTGGACAATTGGCTCGGGCAGTTATCAATTCACCTGGAACATTTCTCCAACGCCGGGAGGATTGGTTGCCGTTTCCGGCAATCATCAAGTCAACCTGACTTGGAATGCTGTCGCCGGCGCGGCCAGTTACAATGTCAAGCGCTCCGTCGTGTCCGGCGGGCCTTATTCAACCATCGCCGCCGAGGTTATGGGAACGAATTACACTGACACTGCGGTGACCAACGGCGGAACATATAATTACGTTGTTTCGGCGAATTCAGACTCGATTGAGAGCGCCACTTCATTTGAAGTCAGCGCCACACCGCAATTCGTTTCCAATTTTGGCTTCGAGACACCCAGGGTCTCCACTTATGAGTATAACCCGTCGGGAGGCGCCTGGACGTTCACGCCGCAATCGGGCAACAACGGCTCCGGCATAACCGCCAACGGGTCGTTATTCAACAGCAGCAATCCGAATGCACCGGAGGGGAGTCAGGTCGCGTTTCTTCAGGGAATTGCCACAATTTCACAGACCATTTCCGGATTTGTGCCCGGGGCGACTTATTCCGTGATCTTTTCGGCGGCACAACGGGCCGGAATCTACCAGCAAAGCAGCCAAACCTGGGATCTCAAGGTGGACGATGCGGTGATTGCCGCCTACGCCCCGTCGGCATCGGCAACGAGCTATGTGGATTACACCACCAGCTTCACCGCAACGGCGGCCACACACACACTTTCATTTGATGGCACGGACTTACTTGGTGCTGATAACACGGTGTTTCTGGATAATGTTCGCATTGTGCCGGCACCGTCGTTGGCCGCAGTCCAACTGGGCTTGCAGATGACAAAGCTGCCGTCCGGGAATCAACTTCAAATTTCCTGGCCGGCGGATCATACCGGCTGGCATTTGCAAATGCAGACGAAAGACCTGGGAACCAACTGGGTTGATTTGCCCAATGCGGATTATGTCAACACGTTGCAATTGCCTATGACCAGCAACATTGCTTTTTATCGCCTGGCTTATCCGTGA
PROTEIN sequence
Length: 1622
MLLAFGIFQSHAITVTNLCCEDRDNPLGIDVLQPRLGWTLESSQRGDTQTAYQILAASSQSLLDSGVGDLWDSGMVVTNRHIQIPYQGAALQTSQPVFWKVRSWDGSNVPSAWSADATWAMGVLNPADWQAQWITRRPRQSIGYHAQTSTSQNVTKWVQVDLGQADTITNITLHPKWHQGIPGYGFPVRFRVEISNDPTFATATTITHQTSSDYPNPGDFPVSFPVANLSARYVRVTATKLYYYATDNDYTFALSQLEVLSGGTNVALDASVSAFDSIEQNGWGKAGLTDGAGFVGCDYGRRLRREFYVQPGLRRAVVQVCGLGEYELFANGSKAGNDLLSPGWSYYGPRPWQVGTNQTVLYNTRDITAQLQPGATNAIGLILGNSFYNVTPGYGRYVKPDFNQNLPFGPLCAIVQLQLDYSNGTTQIIGSDTNWQTGPGAITFENVYAGEDFDARLDQLQTGWDQPGFTNPEWTPAALTNGPGGVLKGSSCSAPPIEKFDVFTPIATNVISTITNNAAGAQIISWNENNSASIPPAGISGVVASNWNNLIAVISLYDNNGAATTASFSISGSWGAWGIGASGYGSPDADGTYNRTLLGGYANTSSGVGPEVFSISGIPYTNYNIVVYFSSDTAGRSGTISSVDAGTTYDFTTIGPASVSGSNAVLSQTTDTTGANPSANYAVFANLGGSSETLTLNVPQGGGIAGFQIVAAASQPSTLVYDLGQNATLMPELQVSGPAGSYVRIIPSELLGANGLVDRTTCTQGSNPPLPAWWQYTLNGSGTERWTPQFFIHGCRYLQVELYPAPGGGMLPTIQSLQGVAVHSASKPIGTFSCSNPLFNEIYSLVRWAQVNNMESYLSDCPHRERLGWLEQDWLNGPSLRYNFNLAPLFTKIENDIFDSQWTNNGFVPNIAPEYFQTSGSLTDPFHNSPEWGSTFIQGAWQQYEFSDDVSLLQRFYPAMKKYLGFLTGEAGTNSIIPVDLGDWYDLGQLSAGVFSGTSLTSKSLPGTATYYADAVVMAKMAQVLGNSADATYYNQLAAAIRAGFNATYFNPANGTYDTSSQTANGMPLALGMVNSTNIASVNAALVNDIQSRNDALTSGEIGIGFVFRALEQAGRNDVVSAMLNQTGTPGYGYQIAHGATSLAERWDAANSSFSSQDHFMCGEVMEWFYHGLVGIQPDPSGPGFQKIIIHPGIGSGLTFAAASYNSANGLITNQWTVDNDLVSMNMSIPPGSIATVYVPVLQTNLAGLTIQESGVTIWTNGTTAGSSPDVTNAGVVTTNGQSSVLWTIGSGSYQFTWNISPTPGGLVAVSGNHQVNLTWNAVAGAASYNVKRSVVSGGPYSTIAAEVMGTNYTDTAVTNGGTYNYVVSANSDSIESATSFEVSATPQFVSNFGFETPRVSTYEYNPSGGAWTFTPQSGNNGSGITANGSLFNSSNPNAPEGSQVAFLQGIATISQTISGFVPGATYSVIFSAAQRAGIYQQSSQTWDLKVDDAVIAAYAPSASATSYVDYTTSFTATAATHTLSFDGTDLLGADNTVFLDNVRIVPAPSLAAVQLGLQMTKLPSGNQLQISWPADHTGWHLQMQTKDLGTNWVDLPNADYVNTLQLPMTSNIAFYRLAYP*