ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_220752_42

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 55494..56825

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9N3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 439.0
  • Bit_score: 627
  • Evalue 5.50e-177
Uncharacterized protein {ECO:0000313|EMBL:EEF63277.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 439.0
  • Bit_score: 627
  • Evalue 7.70e-177
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 442.0
  • Bit_score: 379
  • Evalue 7.40e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1332
ATGTCTCCTCACGAACAAGCTCAATTCATTCGCAATTCCCTTCCGTCCGGCGGGTTGTTCGCCGGCATGGAATGGAAAGTTTCACCCGCGCCGTTTCCGCTGGGCGACAAGCTGGCGAAAGACATCGAATCGCTCGGGCGCGTGCTGCTGCAATTTTATCGCGCGGTCAATTTGCTTTACCGCAAGAGCGTTGAAGGCAAGCAGCCGGAATGGGTCGCGCACTGGCTGGATTTGGGCAAGCCGGCGGAACTAATCGAACTTCAACGGGCCGCCGCTTTCAAGAGCGATGTGCCGCGCGTCATTCGCCCCGACATTCTGCTCGCGGAAGACGGCTTCAGCATCACGGAATTGGATTCCGTTCCCGGCGGCATTGGCCTGACGGCGTGGCTGAACCAGACGTATTCCCAATCCGAAATCCGAAATCCGAAATCCGAAATCCTGGGCGGTGCCGACGGCATGTTGCGCGGGTTTGAATCCATTTTTGGCGACGCCAAAAAGGTGCATCTAATCGTTTCGGAAGAAGCCAAGACGTATCAGCCGGAAATGGAGTGGATCGCGGCGCAGTTGAACCAAAAACGGCCTGCAACCTTCAGCGTTCAACCTTCAACCTTCAGCGGGTTTGCCGAAGGCGACGCGGTTTATCGATTCTTCGAGCTGTTCGATTTGCCAAACGTCGCCAATGCGAAACAAATCTTTGAGCTGGCGAGCGAAAAGAAAATCCGCCTGACGCCGCCGCCCAAGCCGATCTTCGAGGAGAAAATGCTCTTCGCGCTGCTGTGGAATCGCAACCTGCAAAATTTCTGGCGGCAGGAACTGGGCGAAAGTTTTCTGGCGCGGCTCAAGAAAGTGATTCCCTACACGTGGCTCGTGGACCCAACGCCCTTGCCGCCGCACGGCGCGATTCCTGAACTGAACCTGACGGACTGGCAGCAGTTGAAAACGCTGTCGCAAAAGGAGCGCGATTTGATCCTGAAAGTTTCCGGTTTTTCGGAAAATGCCTGGGGCGCGCGCGGCGTGTTTCTCGGCAGCGATTTGTCGCAGGCGGATTGGAGCGTGGCGGTGGACGCGGCGCTGCGCGATTTTGCGCAGTCGCCAAGTGTTTTGCAGCGATTCCACAAACCGGCGCAGGTGGACGCGAGCTGGTTTGATTTCGCGAAAAACGAGTTGGTGCCAATGAAAGGTCGGGCGCGGCTTTGTCCGTATTATTTTGTCAGCGGCGAAGGCGACGCGGCACGGCCGACGCTCGGCGGTGTGCTGGCGACGGTTGTGCCGGCCGATAAAAAAATCGTGCATGGCATGACCGATGCGGTGCTGGCGCCGTGTTCGGTATGA
PROTEIN sequence
Length: 444
MSPHEQAQFIRNSLPSGGLFAGMEWKVSPAPFPLGDKLAKDIESLGRVLLQFYRAVNLLYRKSVEGKQPEWVAHWLDLGKPAELIELQRAAAFKSDVPRVIRPDILLAEDGFSITELDSVPGGIGLTAWLNQTYSQSEIRNPKSEILGGADGMLRGFESIFGDAKKVHLIVSEEAKTYQPEMEWIAAQLNQKRPATFSVQPSTFSGFAEGDAVYRFFELFDLPNVANAKQIFELASEKKIRLTPPPKPIFEEKMLFALLWNRNLQNFWRQELGESFLARLKKVIPYTWLVDPTPLPPHGAIPELNLTDWQQLKTLSQKERDLILKVSGFSENAWGARGVFLGSDLSQADWSVAVDAALRDFAQSPSVLQRFHKPAQVDASWFDFAKNELVPMKGRARLCPYYFVSGEGDAARPTLGGVLATVVPADKKIVHGMTDAVLAPCSV*