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berkeley_reactor_200306_planktonic_scaffold_220752_46

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(58796..59362)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL80_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 129.0
  • Bit_score: 101
  • Evalue 5.80e-19
Response regulator receiver protein {ECO:0000313|EMBL:EEF59431.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 129.0
  • Bit_score: 101
  • Evalue 8.20e-19
GAF sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 139.0
  • Bit_score: 86
  • Evalue 7.20e-15

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 567
ATGAACGGCATCACGGAATTCATTCCCCAGATGAAACGCATTGAAATCAAGTTCTTGAACAAAGGAGAGGCATCCATGAACACCAACCTTGAAGTTCCCATCAACCACCCGGAAGCAAAACCCGCCCGCGCCACCCGGCGGAAAAAAATCCTGCTGGTGGACGATGATCCCGCCATCCGCCAGATCCTCCTCCGGCTGCTTTCCGAGGAAGGGTATTTCGTCGTCACGGCGGCCAATGAAACCGAGGCGTTTGAGTTCGCCAGCGTCATGTCGTTTGATCTGGTGCTGCTGGACCTGGGCGCGCCGGCCCGGGACGGCTGGGAAATTTTTGAGCAGCTTTACGCGGAAAATCCGTTCCTGGCGATCATCCTCATTACCGCGCGGCCGCATCAGTTTGATTCCGCGTTGACGCCGGGTGTCGGCGCCCTGCTGGAAAAACCGCTCGATTTTACGAAGCTGTTTTTCACCATCCATCGCCTGTTGGAGCGGCCCGCAGAAACCGGCGCGCTGCCGGCTTCCACCCATCCGCACGCGGCGCTGACCTGCAGCCTCACTCCGAACGCATGA
PROTEIN sequence
Length: 189
MNGITEFIPQMKRIEIKFLNKGEASMNTNLEVPINHPEAKPARATRRKKILLVDDDPAIRQILLRLLSEEGYFVVTAANETEAFEFASVMSFDLVLLDLGAPARDGWEIFEQLYAENPFLAIILITARPHQFDSALTPGVGALLEKPLDFTKLFFTIHRLLERPAETGALPASTHPHAALTCSLTPNA*