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berkeley_reactor_200306_planktonic_scaffold_220752_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 60974..62392

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL82_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 472.0
  • Bit_score: 623
  • Evalue 1.40e-175
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF59433.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 472.0
  • Bit_score: 623
  • Evalue 2.00e-175
NtrC family two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 468.0
  • Bit_score: 446
  • Evalue 6.80e-123

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1419
ATGAATCCTTCCCCCAAGATTCTCCTCGTCGAGGATGATTCCGCCATTGTCGCCACGCTCCGGCGGGTGCTCGCCGACGAAGGTTACGCCGTGGCGATCGAGCAAAACGGCGAGGCCGGCCTGGCGCGGGCCCGGGCCGAGGAATTTGATGTCGTGATCACCGACTTGAAATTGCCCGGCAAAACCGGGCTGGAACTGGTGCGCGAACTTCATGCCAGCCGCCCGCGACTGCCGATCCTGATGATGACGGCGCACGGCACCACGGAAACCGCCATCGAAGCCACGCAGTCCGGCGCGTATGATTACCTGCTCAAGCCGTTTGAAATTCCCGAGCTGTTGCAACTGGTGGCCGGCGCGGTCGCGGCCAGCCGGCTGATGTCCGAACCGGTGCAGATCGGCCAGCCCGGCCCGTCGCGGCTGGCGATTGTCGGCAACAGCCGGGCCATGCAATCCATTTACAAGGAAATCGGGCGCGTCGCCGCCAAGCCGGTGAGCGTGATGATCCGCGGTGAAACCGGCACCGGCAAGGAGCTCATCGCCCGCGCGATTTACCAGCACAGCGACCGCGCCAACGCGCCGTTCGTCGCCATCAACTGCGCCGCCATTCCGGAAACCCTGCTGGAAAGCGAATTGTTCGGTCACGAACGCGGCGCCTTCACCGGCGCGGAGTCGCGGCGCATCGGCCGTTTTGAACAGGCGGACAAGGGCACGATTTTTCTCGATGAAATCGGCGACATGACGCCCGGCACGCAGGTGAAGTTGATGCGCGTCCTGCAGGAGAAAACGCTGCAGCGCCTCGGCGGCAAGGAAACGATTCCCGTGGACGTGCGCGTCATCGCCGCCACGCATCGCGATCTGGAAACCGCCATCAGCAAAAACCAGTTTCGCGAAGATCTCTATTATCGCATCAGCGTGGTGGTGTTGAATCTGCCGCCGCTGCGGGAACGCAAGGAGGATATTCCGGATTTAATCCGGTTTTTCCTGCAAAAATACGGCGCGGAGTTCGGCGTGGAAAATCCGTCCATCCACCCGGACGCCATGGAATTTCTCCAGGCGCAACCCTGGCCCGGCAATGTGCGCGAGCTGGAAAATGTCACCCGCAAAATGCTGCTCGCCGCGCAGAGCTACACCATCAGCGTCGAGCATGTGCGCTCGGCCCTGGTCAAAGCCCCGCCGCCGCCGGCCTCGCCCGAAAAATCCATTCAAGCCTACGCCGAGGAATTGATCGCCGCCGCCCAGCGCGGCGAACTGGCGGATGCCCACGCCCGCATGCACGAAGCCGCCGAACGTGCCCTCATCAGCCGCGCCATTGAACTGGCGCAGGGCAACCAGGCCAAAGCCGCCCGCTGGCTGGGCATTTCCCGCCTGACTATGCGCGAAAAACTCATTCAGTTCGGACTGCACCCCAATCAGGAGTAA
PROTEIN sequence
Length: 473
MNPSPKILLVEDDSAIVATLRRVLADEGYAVAIEQNGEAGLARARAEEFDVVITDLKLPGKTGLELVRELHASRPRLPILMMTAHGTTETAIEATQSGAYDYLLKPFEIPELLQLVAGAVAASRLMSEPVQIGQPGPSRLAIVGNSRAMQSIYKEIGRVAAKPVSVMIRGETGTGKELIARAIYQHSDRANAPFVAINCAAIPETLLESELFGHERGAFTGAESRRIGRFEQADKGTIFLDEIGDMTPGTQVKLMRVLQEKTLQRLGGKETIPVDVRVIAATHRDLETAISKNQFREDLYYRISVVVLNLPPLRERKEDIPDLIRFFLQKYGAEFGVENPSIHPDAMEFLQAQPWPGNVRELENVTRKMLLAAQSYTISVEHVRSALVKAPPPPASPEKSIQAYAEELIAAAQRGELADAHARMHEAAERALISRAIELAQGNQAKAARWLGISRLTMREKLIQFGLHPNQE*