ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_220752_54

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 69877..71325

Top 3 Functional Annotations

Value Algorithm Source
Gram-positive signal peptide protein, YSIRK family n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7C1_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 483.0
  • Bit_score: 314
  • Evalue 1.10e-82
Uncharacterized protein {ECO:0000313|EMBL:KFN38242.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 476.0
  • Bit_score: 380
  • Evalue 1.80e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Smithella sp. F21 → Smithella → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGTTTGACTTCGAACTGCCCGAACGTTTCCGTCGTTATGTTCCGCCGGCCGTGTGGTTGATCGTGGCGGGCGTGCTGCTGCTGATCCCGCTGAAGATCATCAGCTACGGGTATCTGCCCGGCGACGATGCGTTGCGCCATTGCGCCAAGGCGGTGAGCGGCAAGCCCTGGCCGGACATCCTCGTCCTCGGCAAATCGTTTGAACTGGATCACAATCTGGGCTGGCACGCGCTGCTGGGCGCGGTGCATCGGGCGACCGGCTGGGGCGCCGAAAGCCTGGTGGTCTTCTGCGTGGTGGGTTTGTTTCTGCTCGTCAACGGCGCCGTGCTTCCGTTTCTCAAACGGCCCGAGGCCTGGCTGGCGGCGTTGCTGGCGGCGATGCTGGTGTCCGATGTGCCGCAGCGTTTTCTGCTGGGCCGGCCGTTCGCCATTTCCATCGCCGTGCTGATGGTGATCCTGCTGGAAACGCAAAAGGCGGGTCCATCGCTGAAACATTTCGCGGGGTTCACGGTCCTGCTCGTCCTCTGCACGTTTTTTCACGGCGTCTGGTATTTGTGGCTGGTGCCGCTGGCGGCTTTTGGCTTTGCGGGCCAATTCCGCTGGCTGCTGGTGCTGGGCGGAGCGTGGGGGCTGGCCAGCGTTTTATCCGCGCTGCTGACGGGGCATCCGTTGGAATATCTTTCCCAGGCGCTGGAAATGGCGCTGCACGCGGTCGGCAAGCATGCGACGAGCGGCACGGAAGTCGAGGAATTGCGTCCGTTTGGCGGCAATGTTCTGGCGGTGGTCCTCGTGGGCGCGTTGATCGGGCTGCGTTTGCTGGTCCGGCTGAACACGCTGGCGGTGGCGCGCAATCCGGCATTCTGGCTGATGTGCGGCTGCTGGATTCTGGCGTTTCGCGTGAGCCGGTTCTGGGAAGACTGGGGCTGGCCGGCGTTGATGGTCTTGATCGCGCTGGACCTGCAGGCGCTGTTTCAATCGCGCTTCGCCGCCGATTCGTTCCGTCGTCTGCTGCTGGCCGCCGTGCTTGCGCTGGCCGCTTTTTTCGCCGTGACCGGTGATTTCAACAGCCGCTACACGAAAAGTCTCGACTGGCAGTTTCTTTCCGTGCGGGAACATCCCGACCTGCAGGGCTGGATGCCGGACAAGGGCGGCATTCTTTACTCCGCCGACATGGGGATTTTTTACCGGACGTTTTTCAAGAATCCGCACGCGGATTGGCGCTACATTCTGGGCTATGAACCCGCGTTGATGCCGGCGGATGATTTCAAGACGTATCACAGCATCCTGTGGAACAACGGCGACGCCGCCGCCTACGCGCCGTGGGTGCGGAAAATGACCCCGGCCGACCGTTTGGTGATTCCCGGAAACGGCCATCAACGGCCCGACATTCCGCAACTGCAATGGAAATACGCCATCACCGGCCTTTGGCTCGGGCGAACGCCGCGTTGA
PROTEIN sequence
Length: 483
MFDFELPERFRRYVPPAVWLIVAGVLLLIPLKIISYGYLPGDDALRHCAKAVSGKPWPDILVLGKSFELDHNLGWHALLGAVHRATGWGAESLVVFCVVGLFLLVNGAVLPFLKRPEAWLAALLAAMLVSDVPQRFLLGRPFAISIAVLMVILLETQKAGPSLKHFAGFTVLLVLCTFFHGVWYLWLVPLAAFGFAGQFRWLLVLGGAWGLASVLSALLTGHPLEYLSQALEMALHAVGKHATSGTEVEELRPFGGNVLAVVLVGALIGLRLLVRLNTLAVARNPAFWLMCGCWILAFRVSRFWEDWGWPALMVLIALDLQALFQSRFAADSFRRLLLAAVLALAAFFAVTGDFNSRYTKSLDWQFLSVREHPDLQGWMPDKGGILYSADMGIFYRTFFKNPHADWRYILGYEPALMPADDFKTYHSILWNNGDAAAYAPWVRKMTPADRLVIPGNGHQRPDIPQLQWKYAITGLWLGRTPR*