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berkeley_reactor_200306_planktonic_scaffold_220752_92

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 107540..108397

Top 3 Functional Annotations

Value Algorithm Source
Formate/nitrite transporter family protein n=1 Tax=Rhizobium sp. CF080 RepID=J2STP4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 272.0
  • Bit_score: 463
  • Evalue 1.20e-127
Formate transporter {ECO:0000313|EMBL:KGD96335.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 281.0
  • Bit_score: 473
  • Evalue 1.20e-130
Formate/nitrite transporter similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 283.0
  • Bit_score: 461
  • Evalue 9.50e-128

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGTCCTACTTACCCCCAACGGATTTCGTCACCAAGATGGTGGACGCCGGCGAATCCAAAGTTTTCATGTCCACCCGGGACACCTTGATCCGCGCTTACATGGCGGGCGCCATCCTCGCACTGGCCGCCGCGTTCGCCGTGACCATCACGGTGCAAACCGGCAACGCCCTGGCCGGCGCCATCCTCTTCCCGGTGGGCTTCTGCCTGCTTTATCTCATGGGGTTTGATTTGCTGACCGGCGTCTTCACCCTCGTGCCGCTCGCGCTGCTCGACAAGCGGCCGGGTGTGACCCTCAAGGGCGTCCTGCGCAACTGGTGGCTCGTGTTCATCGGCAATTTCGCCGGCGCGCTGACCGTTGCCGTCATGATGGCGGTCATTTGCACCTTTGCCTTTACCGTGGAGCCCAATGCCGTGGGTCAGAAAATCGGCCACATTGGAGAATTGCGAACCCTCGGCTACGCCGCGCACGGGGCCGCCGGCATGCTGACGCTCTTTATCCGGGGCATTCTCTGCAATTGGATGGTTTCGACCGGAGTGGTGGCGGCCCTCATGTCCACCAACGTTTCCGGCAAGGTCATCGCGATGTGGATGCCGATCATGGTGTTCTTTTACATGGGCTTCGAACATTCGGTGGTGAACATGTTCCTTTTCCCGTCCGGGCTCATGCTCGGCGGCAAGTTTTCCATCATGGACTACTTCATCTGGAACGAAATTCCCACCGTGCTGGGCAATCTGGTGGGCGGCATCAGTTTCGTCGGCTTGACCCTTTACTCAACCCACATCCGAACCGCGCCCAAGCGGACGGCCAAACCGGCCGAACCCAAAGCTCCCGTCGAAGCGGAACCGCAGCTCTCGTGA
PROTEIN sequence
Length: 286
MSYLPPTDFVTKMVDAGESKVFMSTRDTLIRAYMAGAILALAAAFAVTITVQTGNALAGAILFPVGFCLLYLMGFDLLTGVFTLVPLALLDKRPGVTLKGVLRNWWLVFIGNFAGALTVAVMMAVICTFAFTVEPNAVGQKIGHIGELRTLGYAAHGAAGMLTLFIRGILCNWMVSTGVVAALMSTNVSGKVIAMWMPIMVFFYMGFEHSVVNMFLFPSGLMLGGKFSIMDYFIWNEIPTVLGNLVGGISFVGLTLYSTHIRTAPKRTAKPAEPKAPVEAEPQLS*