ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_220752_111

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(132880..133923)

Top 3 Functional Annotations

Value Algorithm Source
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 346.0
  • Bit_score: 496
  • Evalue 2.10e-137
Threonine aldolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKJ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 346.0
  • Bit_score: 496
  • Evalue 1.50e-137
threonine aldolase similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 340.0
  • Bit_score: 493
  • Evalue 3.60e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1044
ATGCAGCTGAAACGCACCCGCCATTTTGCCAGCGACAATTACTCCGGCATCTGTCCCGAAGCCTGGGCCGCGATGGCCGAGGCGAACGCCGGGCACGAGGTCAGCTACGGTAACGACATCTGGACCCAGCGCGCCGCCGACCGACTGCGCGAAATTTTTGAGACCGACTGCGAAGTGTTCTTCGTTTTCAACGGCACTTCGGCGAATTCCCTTTCGCTCGCGTCGCTCTGCCAGCCGTATCACAGCATTCTCTGCCATGAACTGGCGCACATCGAAACCTCTGAATGCGGCGCGCCGGAATTTTTTTCCAACGGCAGCAAAATCCTTCTGTTACCCGGCGAGAACGGCAAAATGCAGCCCGCCGCCGTGGAGCACGCGGTGAAACGGCGCAGCGACATTCATTATCCCAAGCCCGGCGCGCTGAGTCTCACGCAGGTCACGGAAGTCGGCACGGCTTACTCGGTTGCCGAAATTCAGGCGCTGACCGCGACCGCCAAATCACTCGGCCTGCGCGTGCAGATGGACGGCGCGCGCTTCGCCAACGCCGTGGCTTCGCTGGACGTTTCGCCGGCGGACATCACCTGGCGCGCCGGCGTGGATGTGCTGTGTTTTGGCGGTTCCAAAAACGGCATCGCGCTCGGCGAGGCCGTGGTGTTTTTCGATCACGAACTGGCGCGGGATTTCGATTATCGCTGCAAGCAAGGCGGACAGCTTGCGTCGAAGATGCGGTTTCTCTCCGCGCCGTGGCTGGGCATGTTGAAGGACGGCGCCTGGCTGCGTCACGCCCGGCACGCCAACGAAATGGCCAAGCGGCTCGAAACCGGTCTGCGCCCGATTCCCGGCGTGAACATTTCCTATCCCGTCCAGTCGAATTCAGTGTTTGCCAAATTCCCCCGGCTGGCCGAGGAACAACTGCGTGAACGCGGCTGGCACTTTTACACCGGCGTCATTACGCCGGAAGAATCGCGCCTCATGTGCAGTTGGGACACGACGCCGGAGGACGTGGATGCGTTCGTCGCGGATTTGAAACAATTAACGCATTGA
PROTEIN sequence
Length: 348
MQLKRTRHFASDNYSGICPEAWAAMAEANAGHEVSYGNDIWTQRAADRLREIFETDCEVFFVFNGTSANSLSLASLCQPYHSILCHELAHIETSECGAPEFFSNGSKILLLPGENGKMQPAAVEHAVKRRSDIHYPKPGALSLTQVTEVGTAYSVAEIQALTATAKSLGLRVQMDGARFANAVASLDVSPADITWRAGVDVLCFGGSKNGIALGEAVVFFDHELARDFDYRCKQGGQLASKMRFLSAPWLGMLKDGAWLRHARHANEMAKRLETGLRPIPGVNISYPVQSNSVFAKFPRLAEEQLRERGWHFYTGVITPEESRLMCSWDTTPEDVDAFVADLKQLTH*