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berkeley_reactor_200306_planktonic_scaffold_220752_116

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(137752..138579)

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLC2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 275.0
  • Bit_score: 357
  • Evalue 6.60e-96
Inner-membrane translocator {ECO:0000313|EMBL:EEF59325.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 275.0
  • Bit_score: 357
  • Evalue 9.20e-96
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 275.0
  • Bit_score: 348
  • Evalue 1.50e-93

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 828
ATGGTTTATGGTATCCTGCGCTTCATCAATTTTGCCCACGGCGACGTCTTCATGCTGGGCGCGTTTTCGGGGTTTTACCTCGCGCCGAAAATCGCCTCCGTCCTGCCGCTGCCGTCCATTGCCGGCGGCATTGCGGTCATGCTCGCCTCCATGGCCATCTGCGCCGGGCTCGGCGTGCTGATCGAGCGGTTCGCCTACCGCCCGCTGCGTTACGGCCCCAAACTGACCGTGCTCATCACCGCCATCGGCGTCTCGTTGTTTCTGGAATACACCGGCCAGTTTGTTTTTGGCGCCGCGCCCAGGAGTTTTCCCCAGATTCTGCCGGTTTATCCCATCGCCAGATTCGGCGGCCTGAGCCTCAACAGCAACCAGGTCATCGTCATCGCCGTCACCCTGGCGTTGCTGCTCGGGCTGCGGTTCATCGTGCTGAAAACGCGCATCGGCATGGCCATGCGCGCCGTGTCCTTCAACCCCGAAGCCGCCGCGCTCATGGGCGTGAACACCGACGTGGTCATTTCCTTCACCTTCGCGCTGGGCTCGGCACTGGCGGCGGCCGCCGGCATTTTGTGGTCGGTCAATTATCCGGCCATTGACCCGCTCATGGGCATCCTGCCGGGACTGAAGGCCTTCGTCGCGGCGGTGCTGGGCGGCATCGGCAACCTGCCGGGGGCGGCGCTGGGCGGCATCATCATCGGCGTCACGGAAACACTCGTGTCCGGTTACATTTCCTCGACGTATCGCGATGCCATCGCCTTTGCCATTTTGATTCTGATTTTGCTGGTGAAACCCGCGGGCCTCCTGGGGCGAAAAGAGATTGAGAAGGTATGA
PROTEIN sequence
Length: 276
MVYGILRFINFAHGDVFMLGAFSGFYLAPKIASVLPLPSIAGGIAVMLASMAICAGLGVLIERFAYRPLRYGPKLTVLITAIGVSLFLEYTGQFVFGAAPRSFPQILPVYPIARFGGLSLNSNQVIVIAVTLALLLGLRFIVLKTRIGMAMRAVSFNPEAAALMGVNTDVVISFTFALGSALAAAAGILWSVNYPAIDPLMGILPGLKAFVAAVLGGIGNLPGAALGGIIIGVTETLVSGYISSTYRDAIAFAILILILLVKPAGLLGRKEIEKV*