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berkeley_reactor_200306_planktonic_scaffold_220752_118

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(139116..140303)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLC1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 381.0
  • Bit_score: 491
  • Evalue 7.20e-136
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EEF59324.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 381.0
  • Bit_score: 491
  • Evalue 1.00e-135
ethanolamine utilization protein EutJ similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 355.0
  • Bit_score: 459
  • Evalue 8.50e-127

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1188
ATGTTTACCCGTTTTGATTTTATGATGAACCACTGGCACAAACGCATGGCCCTGGCCGCCGTCCTGGCGACCGCCGCCGTTTTTACCGGCTGCAAACCCGCCGCCACCCCTGCGTCCGGCGGCGCCGCCGGAAACACGATCAAGGTCGGGGAATACGCCTCGCTGACCGGCAGCGAAGCCACGTTCGGCCAGTCTTCCCACAAGGGAACGGAACTGGCCGTCGAGAAAATCAATGCCGATGGCGGCGTGCTCGGCAAAACCTTCCAGTTGATCACCGAGGACGACCAGTCGCAGGCGGGCATGCCTTCGACCGTGGTGCGCAAGTTGATTTCCGACAACGGCGTGGCGGCCGTCCTGGGTGAAGTGGCGTCGTCCCGCTCGCTCGAAGCCGCGCCGATCTGCCAGCAAAATCATATCCCGATGATTTCGCCGGCCTCGACGAATCCCAAGGTGACCGAAGCCGGCGATTACATTTTCCGCGTCTGTTTCATTGACCCGTTCCAGGGCACGGTCATGGCGAATTTCGCGCGCAAAACGCTCAAGCTGCAAAACGTCGCCGTGTTCACCGATGTCAAAAGCGATTACAGCCTCGGCCTGGCGGAATTTTTCAAGAAAGGCTTCACTGGCGACGGCGGCAAAATCGTCGTGGAACAGAATTACAGCGCTGGCGACAAGGATTTCAACGCGCAGCTCACCGCCATCAAGGCCGCGAATCCCGACGGCATTTTTCTCCCGGGCTATTACACCGAGGTGGGCTTGATTGTGCGGCAGGCGCGCCAACTGGGCCTCACCTGCCCCATCTTCGGCGGCGACGGCTGGGAATCCTCCTCGCTGGTGCCCATCGGCGGCAAGGCGCTCGAAGGCTGCTATTTTTCCACGCATTATTCCCCCCAGTCCACCTCGCCGGCCGTGCGGGATTTTGTGAAAGCCTACCAGGCCAAATACCATGAAACCCCGGATGCCATGGCCGCGCTGGGTTACGACTCCGCGATGATCCTGGCGGACGCCATGAAACGCGCCGGTTCCTCCGACGCCGCCAAGGTCCGCGACGCGCTTGCCGCCACCAAGGATTTCCACGGCGTGACCGGCGACATCACCATTGATCCCAACCGCAACGCCTCCAAGCCCGCCGTCATCCTCACCATCAAAAACGGCGCCTTCAAATACGTTCAGACCATCAAGCCCTAG
PROTEIN sequence
Length: 396
MFTRFDFMMNHWHKRMALAAVLATAAVFTGCKPAATPASGGAAGNTIKVGEYASLTGSEATFGQSSHKGTELAVEKINADGGVLGKTFQLITEDDQSQAGMPSTVVRKLISDNGVAAVLGEVASSRSLEAAPICQQNHIPMISPASTNPKVTEAGDYIFRVCFIDPFQGTVMANFARKTLKLQNVAVFTDVKSDYSLGLAEFFKKGFTGDGGKIVVEQNYSAGDKDFNAQLTAIKAANPDGIFLPGYYTEVGLIVRQARQLGLTCPIFGGDGWESSSLVPIGGKALEGCYFSTHYSPQSTSPAVRDFVKAYQAKYHETPDAMAALGYDSAMILADAMKRAGSSDAAKVRDALAATKDFHGVTGDITIDPNRNASKPAVILTIKNGAFKYVQTIKP*