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berkeley_reactor_200306_planktonic_scaffold_220752_125

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 148362..149921

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRE5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 510.0
  • Bit_score: 679
  • Evalue 1.90e-192
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEF57579.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 510.0
  • Bit_score: 679
  • Evalue 2.60e-192
proP; Permease of the major facilitator superfamily similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 510.0
  • Bit_score: 539
  • Evalue 6.50e-151

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1560
ATGCACGAGGAATGGAAACCCAGCCACAGCCCCTGGCTCATTGCCGTGGGGGTGATGCTGGCGACGTTCATGGAGGTGCTGGACACCACCATCGCGAACATCGCACTGCCGCACATCGCGGGCAGCTTGTCGGCGACGCCGGAGGAGGCGACGTGGATTCTCACGAGCTATCTCGTGGCCAACGCGATTGTGTTGCCGACCACCGGCTGGCTGGCGAATCATTTCGGGCGCAAGCGGGTGTTCATGTCCTGCATCATCCTGTTCACGGTGGCTTCGATGCTGTGCGGACTGGCCTGGAGCCTGCCGACGCTCATCATGGCGCGCGTGCTTCAGGGGCTCGGCGGCGGCGCCATGGTGCCCATCGCCCAGGCCATCATGCTGGAAAGTTTCCCGCGTTCCAAACGCGGTGCCGCCATGGCCATCTTCGCGCAGGGCGTGGTGGTGGCGCCGATCCTCGGGCCGGTGCTGGGCGGCTGGATCACGGACAGTTATTCGTGGCGCTGGATTTTCTACATCAATCTGCCGGTGGGAATTCTGGCGCTTTCCATGGCTGAATGGCTGGTGGAAGACCCGCCCTACATCCAGCGCAACAAGGGCGCGACAATTGATTATGTCGGCCTGGGCCTGTTGATCGTCTGGCTGGCTACCCTGCAGATTCTCCTGGATAAAGGCCAGGAAGCCGACTGGTTCAACACCGACTGGGTGCGCTGGTTTGCGGTGATTTCGGCCACGTCGTTCATCGCCTTTGTCTGGTGGGAGTTTACCGTGGATCATCCGCTGGTGGATTTGCGTGTATTTAAAAACCGCAACTTCACCGTCGGCCTGCTGCTGATGACCACGCTGGCCGGCATTCTCTACGGCACCACGGCGCAGATTCCCTTGTTCCTGCAAACTCTCATGGGCTATCCGGCGCTGCAAAGCGGCTACGCGCTCGCGCCGCGCGGGGTGGCGGCCTTTTTCACGACGTATATCGTCGGCCGGCTGGTCGGCAAAGTGCGGTCGCGTCACATGATGCTGTTTGGCTTCAGCCTGCTAGCCGTGTCCTCGTTTCTGCTGGGCCGACTGAACCTCCAGATCGCGCAAATTGACGTCATTGTTCCCAGCATTCTCAACGGCATCGCCATCAGTTTTATTTTCGTGCCGCTGACGACGGCGACGATGAGCCAGTTGGCGCAGCAGCAGCTCGGCAACGCCACCGGCCTCTACAATCTCACCCGCAACCTTGGCGGCAGTTTCGGCATCGCGTTTGTCACCACGATGCTGGCGCGCGGCGCGCAAACGCACCAGGCTTACATGGTCGGGCATCTCACTCCCACCGACCGTCCATTCGCGCAGCACCTCGCGGCTGCCCGGGAAATGCTTTCGCGCCATGCCGATCCGGTAACCGCCACCCACCAGGCCTACGGGCTGCTTTACAATGTGCTGGATCAGCAGGCTCACTTGTGGGCTTACGTGGACAACTTCCGCAAGTTCGGCCTCGCGGCGCTGTGTGCGCTGCCCATGATCTTTCTCCTCAAACGCGTGGCGATGCCGGCCAAGCCGGTAAAAACGGGGCATTAA
PROTEIN sequence
Length: 520
MHEEWKPSHSPWLIAVGVMLATFMEVLDTTIANIALPHIAGSLSATPEEATWILTSYLVANAIVLPTTGWLANHFGRKRVFMSCIILFTVASMLCGLAWSLPTLIMARVLQGLGGGAMVPIAQAIMLESFPRSKRGAAMAIFAQGVVVAPILGPVLGGWITDSYSWRWIFYINLPVGILALSMAEWLVEDPPYIQRNKGATIDYVGLGLLIVWLATLQILLDKGQEADWFNTDWVRWFAVISATSFIAFVWWEFTVDHPLVDLRVFKNRNFTVGLLLMTTLAGILYGTTAQIPLFLQTLMGYPALQSGYALAPRGVAAFFTTYIVGRLVGKVRSRHMMLFGFSLLAVSSFLLGRLNLQIAQIDVIVPSILNGIAISFIFVPLTTATMSQLAQQQLGNATGLYNLTRNLGGSFGIAFVTTMLARGAQTHQAYMVGHLTPTDRPFAQHLAAAREMLSRHADPVTATHQAYGLLYNVLDQQAHLWAYVDNFRKFGLAALCALPMIFLLKRVAMPAKPVKTGH*