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berkeley_reactor_200306_planktonic_scaffold_235821_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 15840..16472

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIM7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 207.0
  • Bit_score: 225
  • Evalue 3.90e-56
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF60290.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 207.0
  • Bit_score: 225
  • Evalue 5.50e-56
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 208.0
  • Bit_score: 202
  • Evalue 1.00e-49

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 633
ATGCACATTTCAGTTGCCATTGTGGAAGACAACCACGGAATGCGGCGCAGTTTTGCGGCGCTCCTGGACCAGACTCCCGGCCTGCGCTGTGCCGGCGCTTACGGCACCGGCGAGGAGGCGGTGCGGGAAATGCCGAAACTGAAGCCGGACGTGGCGCTGGTGGATATTCATCTGCCCGGCATGGACGGCATCCAGGCCGTCCACAAGCTCAAGGAAGCCCTGCCGCAATTGCAGATTTTGATGCTGACGCGCTTTGAACAAAGCGACTTGATTTTTAATTCGATCCGCGCCGGCGCCTGCGGCTATCTGCTGAAGAGCGCCACGTCCTCCGAATTGATTGACGCCATCAAACAGATCCACGCGGGCGGGGCGCCGATGTCCATGCAAATTGCCCGGAAAGTCGTCGCGCATTTTCGCGAGATTCCCAAGCCCTCGTCCGACGTGGAGCGGCTCTCGCCGCGCGAACAAGAACTGCTCGAACTGCTGGCCAACGGCTGTTACTACAAGGAAATCGCCGACCGGCTGGGCATCAGCATGAACACCGTCCGGACGCATTTGCAGCATGTTTACGAGAAGCTCCATGTCCAGACGCGCACGCAGGCGGTTTTGAAATTCCTGGAAAACCGCCCGTGA
PROTEIN sequence
Length: 211
MHISVAIVEDNHGMRRSFAALLDQTPGLRCAGAYGTGEEAVREMPKLKPDVALVDIHLPGMDGIQAVHKLKEALPQLQILMLTRFEQSDLIFNSIRAGACGYLLKSATSSELIDAIKQIHAGGAPMSMQIARKVVAHFREIPKPSSDVERLSPREQELLELLANGCYYKEIADRLGISMNTVRTHLQHVYEKLHVQTRTQAVLKFLENRP*