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berkeley_reactor_200306_planktonic_scaffold_25721_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(1..3561)

Top 3 Functional Annotations

Value Algorithm Source
PKD domain containing protein id=4096970 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 670.0
  • Bit_score: 272
  • Evalue 1.20e-69
PKD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 667.0
  • Bit_score: 214
  • Evalue 8.40e-53
Tax=GWF2_Bacteroidetes_35_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 670.0
  • Bit_score: 272
  • Evalue 1.70e-69

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Taxonomy

GWF2_Bacteroidetes_35_48_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3561
TTGTCTTCTCTACGGGATAGGCTTTTTTTAACATTAAGCGGCACTATCCCACACCGAAAAGAAATTGAACCGGCTAACCCAAATCCACACACTATGACGCACAGATATACTGTAAGCGTACTAAGCTTCTTCCTGCTTTTCTTTTGCAGTTTTGCGGCCAATGCCCAGATATCAGGTACTGTATTCAACGATCTCAACGGCCTTGTCGATAATACCGTGAACGGCACCGGCAGTAATGCTGGCGGCCTTACTGCCGTATTGGTCAATACCACAACCGGCAATGTAACGGCCACGACCGCCGTTGCCGCCAATGGTACTTACTCCTTCCCTGCTCCCGTAAGCGCCACCTACAGTGTGCGCATCACTACGGCTACAGCTACGGTAGGTAGTCCTGCGCCTACCGTTGTATTGCCGATTAACTGGGTAAATACAGGTGAATTTTTGGGTACCGGCGCGGGTAGCGATGGTACGGTGAACGGCATTCTGACGGTCGGTACGGTTACCGCCGCCACCAATGTCAATTTCGGTATCGAACAGCTGCCCAATACCAATGTCAGCACTGCTACGCCGATATCCAATCCCGGCGGTACTACCGTGGCCCTGGTGCCTACGGCCGGTGTGGGTGGTACAGATCCGGATGGTGGCGTGATCGATTCGATCCGTATCCTGAGTTTCCCTACCAATACCACGACCCTTGTGCTGGGCGCCAACAGTTATACGGCCGGCACCTTCCCGGCCGGCGGCGTTACGGTAAATACAACCGTTACCGGCCAGCCGGTACCGGCATTAAGTATCGACCCTACCGACGGCGCTGTTTCTGTAGTGATCACATATGCAGCCATCGACAATGCCAACCAGATAGATCCTACTCCCGGAAGCTTTACGATTCCCTTTACCAATTCGGTAACGGGTACCGTACATAATGATATAAACGGCTTGTTTGGCACGCCGGCCAATACGATAGACGGACCCGGTACCAATGCCGGCGGTCTGAATGCTATAGTGGTAAATACGGTAAGTGGTAATGTTGCCGGCTTTGTTGCCGTGGGCCCTACCGGCGCTTATACCGTTACCGGCTTGCCTAATGGTAACTTTAACGTACTGATCACGACGGCAACGCCCACGATAGGTAGCGCGCCGCCAGCGATAGCCCTGCCCGCCAACTGGGTAAGCACAGGCGAATTCCTGGGCACCGGCGCGGGTAACGATGGCAACGTAAACAGTACCCTGCCCCTGGGCGCCGTAGCCGACAACGTGATCAATGCCCGCCTGGGTGTGGAACAACTGCCCAATACCAATACGACCACCGCAGCGCCACAGGCCAATCCCCCGGGAACGACCAATGCAACCATTGCCGCTACCAACTTCGGTGGTACGGATCCTGATGGCGGCGTTATCGATTCCATCCGTATCCTGTCTTTCCCGACCAATACTACTTCGATTACTATCAATGCGGTTAACTATACTGCCGGTACCTTCCCGGCTGCCGGCGTAGCGATACCGACCAATGCCGCCGGACAGCCTACCTGGCCTATATTACTGGACCCGGTAACGGGTACCGTAAACGTTGTGATTACCTATACCGTGATCGACAATGCCGGTAAACCCGATCCTACACCCGGATCGCTGACGATTCCGTTCCAGGAGACCGGTATGACCGTGATCGACAACCGCACGGCGCTCCAGCTGGTAGAAAAACTGACCGGCTCCGGAGTGGTGGTGCTGAACCCGACCATGACCTGCCCGGGTATTTCCAATGGTACCTTTAGTATAATGGGTGTGAGCAACCTCGGCCTGGATAGCGGTATCGTGCTGACTTCCGGTCGTGCAATGACTATCCCCGGCGGCGCGCAGGGCGTTAACGGACCTAATATCGGTCAGGGGCCCGCGGCCTTTACCTCCGGTGCTTCGATCGATGCAAACCTCTCTACCCTGGTTACCCAGGGACTGAATGACCTGTGCCGCCTGGAGTTCGACTTCGTACCGGCCGGAGATTCAGTTAAGTTTGAATATGTATTCGGCTCTTCAGAATACCAGGGCTTCTCCTGTAGTAACTTTAATGATGTGTTCGGGTTCTTTATATCCGGTCCGGGTATAACCGGCGCCTATAATATGGCGGTAATACCGGGAACAACCATCCCGATCTGTGTAAACAGTACGACCAATCCTACGGTAAATCCGCCTAATAATCTCGGGCTGTGTACCGGCATGGGAACCGGCTCGCCGTTCTCGATGTACTATGTCAATAATGCCGGTGGCGGAACGGTAACCTATCGTGGTTTTACCACCGTATTTACCGCTGCTTCCAAAGTGAACGCCTGTGACACGTACCACCTGAAGCTGGCCATTGCCGACTGTACGGATGGTAACCTGGATTCAGGCGTGTTCCTGAAAGCGGGCAGTCTTTCGTCTACCGCTTTATATGTAAAAACCTTTGGCGGTGGCGGCCTGGAAACGCCGTATACCAACACGGTACGCGGCTGTCCTCCGGGTGTGGTGCGCGTAAGCCGCAGCGGTAACCTGGGCGCACCCATAACCATACCGCTTACCTATACCGGTACCGCGGTCAACGGGCTTGATTACTCGCCGCTACCCAGTGCGGTAACGATACCTGCGGGCGACAGCGCCGTGAACCTGTACGTAAACGGTATCGTGATGGTGCCGCCGGTAGGCCCCAAATCGGTAGTAGTATCCGTATTGTCTCCTTATAACTGTAGCTCCACCAACGAGCCTATCGTATTGGCGAGCGATACGATCATGATCCTGGATTCTATTTATGTAAAGATCCTGAACCCGGATACGGCAATCTGCCGCGGCCAGCACGTAGATCTGAAAGTAGAGGCAGATACGATCCTGAAATTCAGCTGGACCCCGGCCAGTACGGTAAGCGATCCGCTGGCGAAGGATGTGACGGTAACCCCTACCGGGCCTACCCATTATGTGGTATCTGTACTGTTGCCCATAGGCACGGGTTGCCCGCCCTCGACGGACCAGGTATTTATAGATGTAAAAGATACGCCCAAAGTGGATCTCGGTCCGGATAAGGTGACCTGCGGGGATGCGGTGCAACTCAATGCGGCGACGACCCCGGTGAACCCCGACGAGACCTTCCTATGGACGCCGGCAACGGCGCTGAGTAGTACCACGATCCGAAATCCTGTATCGACCCCCACGGGTGATATGGTGTATTCGGTAACGGTTAACCCCGGCGCTGTGGGTTGCGATGGTCATGATACGATTAAGATCCGTTTGTTGCCGGACCATATAACGGTACTGAACCCGGATACGGTCGTCTGCGACGGCGCGCTGATCGCGTTGCGTGTGGATGGAGATACGGCGTTCCACTACAACTGGAACCCGGAACAGGATATCGCCGATCCGTTTGCGTCGAATACGGTGCTTACGGCCCATACTACCGGTTGGTATACGCTTACGGCGTCGTACCCGGGTTGTGTGAGCATGCCGGACAGCTTCCACGTGGAGGTGCAGCCTAACCCGATCGTCAATATCGGTCCTGACCGTACGATCTGTGCTTACGATACGATCCAGCTGTATGCTTCG
PROTEIN sequence
Length: 1187
LSSLRDRLFLTLSGTIPHRKEIEPANPNPHTMTHRYTVSVLSFFLLFFCSFAANAQISGTVFNDLNGLVDNTVNGTGSNAGGLTAVLVNTTTGNVTATTAVAANGTYSFPAPVSATYSVRITTATATVGSPAPTVVLPINWVNTGEFLGTGAGSDGTVNGILTVGTVTAATNVNFGIEQLPNTNVSTATPISNPGGTTVALVPTAGVGGTDPDGGVIDSIRILSFPTNTTTLVLGANSYTAGTFPAGGVTVNTTVTGQPVPALSIDPTDGAVSVVITYAAIDNANQIDPTPGSFTIPFTNSVTGTVHNDINGLFGTPANTIDGPGTNAGGLNAIVVNTVSGNVAGFVAVGPTGAYTVTGLPNGNFNVLITTATPTIGSAPPAIALPANWVSTGEFLGTGAGNDGNVNSTLPLGAVADNVINARLGVEQLPNTNTTTAAPQANPPGTTNATIAATNFGGTDPDGGVIDSIRILSFPTNTTSITINAVNYTAGTFPAAGVAIPTNAAGQPTWPILLDPVTGTVNVVITYTVIDNAGKPDPTPGSLTIPFQETGMTVIDNRTALQLVEKLTGSGVVVLNPTMTCPGISNGTFSIMGVSNLGLDSGIVLTSGRAMTIPGGAQGVNGPNIGQGPAAFTSGASIDANLSTLVTQGLNDLCRLEFDFVPAGDSVKFEYVFGSSEYQGFSCSNFNDVFGFFISGPGITGAYNMAVIPGTTIPICVNSTTNPTVNPPNNLGLCTGMGTGSPFSMYYVNNAGGGTVTYRGFTTVFTAASKVNACDTYHLKLAIADCTDGNLDSGVFLKAGSLSSTALYVKTFGGGGLETPYTNTVRGCPPGVVRVSRSGNLGAPITIPLTYTGTAVNGLDYSPLPSAVTIPAGDSAVNLYVNGIVMVPPVGPKSVVVSVLSPYNCSSTNEPIVLASDTIMILDSIYVKILNPDTAICRGQHVDLKVEADTILKFSWTPASTVSDPLAKDVTVTPTGPTHYVVSVLLPIGTGCPPSTDQVFIDVKDTPKVDLGPDKVTCGDAVQLNAATTPVNPDETFLWTPATALSSTTIRNPVSTPTGDMVYSVTVNPGAVGCDGHDTIKIRLLPDHITVLNPDTVVCDGALIALRVDGDTAFHYNWNPEQDIADPFASNTVLTAHTTGWYTLTASYPGCVSMPDSFHVEVQPNPIVNIGPDRTICAYDTIQLYAS