ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_29121_15

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 21332..22138

Top 3 Functional Annotations

Value Algorithm Source
rfbD-1; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 236.0
  • Bit_score: 157
  • Evalue 4.70e-36
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000348674C similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 260.0
  • Bit_score: 178
  • Evalue 7.00e-42
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 238.0
  • Bit_score: 167
  • Evalue 1.70e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_Elusimicrobia_62_6_curated → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 807
ATGGGCTGGGAAGTAGTAGGTACCCATCTCTCCTACAGCACCGATGCTACTGTATTTTATAACACCCTGGAGCCCGGGCACCCCGATAACTTCGATGTAAAAGCCTTTGCCCCCGATGTGATCGTGCATTGCGGCGCGCTTACCCACGTCGACTACTGCGAGTCTAACCCCGAAGAAAGTTATGAGAAGACCGTACAGAGCACCCGCAACCTGATAGACCTGGCCCTGGCCTGCAAGGCAAAATTTGTTTTTATCTCGACCGACTATGTATTTGACGGCCACAACGGACCTTATCGCGAAGAGGCGTCCGTAAATCCGCTGAGTGTTTACGGGCGGCATAAGCTGGAGGCCGAAACCCTGTCGCTGGAGGCTTTGCCTGATACCCTGGTTTTACGTGTAACGAATGTATACGGCGACGAACTGCGGGGCAAAAACTTCGTAGCGCGTATCGTGGAGCAGTGCCGTGAGGGCAAAAAGTTGACCCTTAAACTGCCTTACGACCAGTTTGCAAACCCTACCAATGCCTTCGATATTGCCCGGGCGATGTTTGTATTACTGCGCGATGGCAAGAAGGGTATTTACCATATCGGCGGCAGCGATTATATGAACCGGGTTGAACTGGCGTTGCGTGTGATCAGTTATTTCCCCGGCGCAGCGTACGACCTGGTGCCGGTAAGCACGGCCGAACTGCAGCAGCCCGCTGCAAGGCCCTTGTTGGGTGGTTTCGTAAAACTGAAATTCGCTTCCGAATACCCCGATTTCCTCTTTGGCACTGTAGACAGCTACCTGCAATCTTTGCTGAAGTAA
PROTEIN sequence
Length: 269
MGWEVVGTHLSYSTDATVFYNTLEPGHPDNFDVKAFAPDVIVHCGALTHVDYCESNPEESYEKTVQSTRNLIDLALACKAKFVFISTDYVFDGHNGPYREEASVNPLSVYGRHKLEAETLSLEALPDTLVLRVTNVYGDELRGKNFVARIVEQCREGKKLTLKLPYDQFANPTNAFDIARAMFVLLRDGKKGIYHIGGSDYMNRVELALRVISYFPGAAYDLVPVSTAELQQPAARPLLGGFVKLKFASEYPDFLFGTVDSYLQSLLK*