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berkeley_reactor_200306_planktonic_scaffold_29121_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(30282..31238)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3B8_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 313.0
  • Bit_score: 324
  • Evalue 7.20e-86
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 313.0
  • Bit_score: 324
  • Evalue 2.00e-86
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADZ78096.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 313.0
  • Bit_score: 324
  • Evalue 1.00e-85

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 957
ATGACGCTCACTCAACTCGAATACGTAGTATCCGTAGCCACCTATAAAAGCTTTGTTGCCGCAGCAGAAAAAAGCTTTGTAACCCAACCCACCTTGAGTATGCAGATACACAAGCTGGAAGAGGAGCTTAATGTAAGGCTTTTCGACCGTAACAAACACCCGATTACCTGTACCGAAGTAGGGGAAGAAATTGTAAGGCAGGCTAAAGTAATTCTTGCAGAAGCCAATAAGATCCAGGAACTTATACAACACCGCCAGGGTTCTGTAGCCGGTACGTTCCGCATGGGTATTATCCCTACCCTCGCCCCCTTTATCCTGCCGCAGCTGCTGGAAAACCATGCCAAAGCACACCCCGAGCTGAAGCTGATCGTAACCGAACTGCAGACCCGCGACATTATCAAAAAACTGAAAGACGACGAAATCGACTGTGCCCTGCTGAGCACCCCGCTCGAAGAAGCACACATTAAAGAATATCCCCTGTTCTACGAATCACTGGTGGCCTATTTCGGCAAGGACGAAAAAGCATTGTCCAAGCGGCTGGTTACCCCCGAAGATATTGATATGAAACGGATGTGGATGCTCAATGAAGGCAACTGTCTCCGTAACCAGATTATGAACCTCTGCAGCGAGCATATCGACAAACTGCAGGAAAACCGCCCGTACCAATACGAATCAGGTAACGTAGAGACCCTGCGTAAAATGGTGGATAAAAACGGCGGTGTAACGATACTGCCCGAACTCGCAACCTTCGAGTTTACCGAAGACCAGACCGAAAGCCTGCGTTACTTCGATGGCGAAGAACCGGTACGGGAGATATCGCTGGTAACCAACGATCACTTTGTAAGGCTCTCGGTATTACAAACCTTAATGGATGAGATCCTGAAACTGGTACCCGAAAAAATGAGGGTGCAGAAAAAGAACCGTAAAATATTAAGGATCCAGGCTGCCAAACTGTAA
PROTEIN sequence
Length: 319
MTLTQLEYVVSVATYKSFVAAAEKSFVTQPTLSMQIHKLEEELNVRLFDRNKHPITCTEVGEEIVRQAKVILAEANKIQELIQHRQGSVAGTFRMGIIPTLAPFILPQLLENHAKAHPELKLIVTELQTRDIIKKLKDDEIDCALLSTPLEEAHIKEYPLFYESLVAYFGKDEKALSKRLVTPEDIDMKRMWMLNEGNCLRNQIMNLCSEHIDKLQENRPYQYESGNVETLRKMVDKNGGVTILPELATFEFTEDQTESLRYFDGEEPVREISLVTNDHFVRLSVLQTLMDEILKLVPEKMRVQKKNRKILRIQAAKL*