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berkeley_reactor_200306_planktonic_scaffold_26454_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 3357..4622

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUZ6_FLAIG similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 421.0
  • Bit_score: 421
  • Evalue 9.70e-115
Outer membrane efflux protein precursor similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 421.0
  • Bit_score: 421
  • Evalue 2.70e-115
Outer membrane efflux protein {ECO:0000313|EMBL:CCG52966.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 421.0
  • Bit_score: 421
  • Evalue 1.40e-114

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Taxonomy

Flavobacterium indicum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAAAATTTGCATTCGCAAGGGGTTCCTGCTATTGCCGCTACTCCTTTCCGGCATCGCTGCGCCTGCGCAGACCAACCTTACATTACCGGACGCGCTGAAAGCCGCTATCGCCAACAATCCCCAGCTGAAAGCCCAGCGCATGAACATTGATGCAGCAGGCGCCGATGTAACCACCGCCGGCCTGAGGCCTAACCTGAACCTGAGTAACCAGACCATAAACCTGGTACACAAACAGGACTTTGCACCGGGCACAGACTGGATCAACAACCATAACCGGCAAACGCAATGGCAGCTCTACAAGCCGATACAATGGCCGGGACAACGCCAGCATAAAATAGACCTGGCCAAACAAACCCAGGTGCTGGTCAGCAAACAATACGAGAGCACCCAGCGCGACCTGTTGTACCAGGTATCCGCAAAATGGCTGCAGGCCTGGACCAGCAATAAACAGCTGAGCCTGCTGTCGCTGGCCAAAAGCAACCTCGACAGCCTGGTAGCGATTAACCGGTACCGTCTCGAGAAACAGGTAATCAGTGCCACCGACCTTACCCGTACCCAGCTACTCGTCAACCAGTTTGATATCCAGATCAGGAATGCCCAGCTGGCCTACGACAACAGCCTGCGCGACCTGGCTTTCCTGGCCGGCGCCACCGGCCCGGTTTCGGTAGATACCGCGCACGGCTTTAGCCAGCATATTAACCTCGCGCCCGACAGCCTGCTGGCTTATGCCCTGGAAACCAGGCCCGACGTGGCTTCGGCCAAAGCGGGTATTGATGCCGCCGGTAGCAATATACGCCTGCAACGCTCGCTGGCCTACCCTACACCCGATGTGGGCGTACTGTACAATCCGCAGAACACGATACCCTACTGGGGCGTTTATGCGGCTATAGACCTGCCCTTCTTTTCCCGCAACCAGGGAGAGATTAAAAAGGCAAAAATTCTGCAGGACCAGAGCCTGCAGAATATGCAGGTGATACAAATGCAGGTAGCTACCGAGGTAAGCAATGCCTATAAAAGCTATTCCATTCAAAAACAGAATACGCAAAAGTTCAAACAACTGCAGGAGCAGGCCCAAACCATACTGGACAATGTGCGCTACGCTTACCTGCATGGCGGCACTACGATCGTAGACTTCCTGGAAGCGCAGCGCAGCTGGCTCGAAACCCAGCAACAGTATTACGAAACCCTGCAGCAATATAGCGAAAGTTATATCCAGCTGCTGTATGTAACCGGTAAGATGAACGAACTGACGGCCGGCGACTAA
PROTEIN sequence
Length: 422
MKICIRKGFLLLPLLLSGIAAPAQTNLTLPDALKAAIANNPQLKAQRMNIDAAGADVTTAGLRPNLNLSNQTINLVHKQDFAPGTDWINNHNRQTQWQLYKPIQWPGQRQHKIDLAKQTQVLVSKQYESTQRDLLYQVSAKWLQAWTSNKQLSLLSLAKSNLDSLVAINRYRLEKQVISATDLTRTQLLVNQFDIQIRNAQLAYDNSLRDLAFLAGATGPVSVDTAHGFSQHINLAPDSLLAYALETRPDVASAKAGIDAAGSNIRLQRSLAYPTPDVGVLYNPQNTIPYWGVYAAIDLPFFSRNQGEIKKAKILQDQSLQNMQVIQMQVATEVSNAYKSYSIQKQNTQKFKQLQEQAQTILDNVRYAYLHGGTTIVDFLEAQRSWLETQQQYYETLQQYSESYIQLLYVTGKMNELTAGD*