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berkeley_reactor_200306_planktonic_scaffold_26454_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 6367..9480

Top 3 Functional Annotations

Value Algorithm Source
cation transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E5074 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 1032.0
  • Bit_score: 1605
  • Evalue 0.0
heavy metal efflux pump, CzcA family similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 1032.0
  • Bit_score: 1581
  • Evalue 0.0
Probable heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:CCG52963.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 1032.0
  • Bit_score: 1581
  • Evalue 0.0

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Taxonomy

Flavobacterium indicum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3114
ATGAAGAACCGGTGGGTGGTCGTAGGACTGGCCATCGCGCTGATGGGAATAGGATTCTGGTGCTTTACCCAATTAAAAATCGAAGCCTACCCGGATATCGCCGATACGAATGTGATCGTGGTGGCGCAATACCCGGGCCGCGCCTCGGAAGAGGTAGAGCAGCAGGTGACCGTACCTATAGAACGGGCCCTGCAGAACACGCCGAATGTAATGGACCGCCGTAGCCGCACCATATTTGGCCTCAGCGTGGTACAGCTTACCTTTAAAGACGGCACCGACGACTACTTTGCCCGGCAGCAGGTAATGGAACGCCTGCAGGGCGCCGAACTGCCCGATGGTGTAGCACCTGAACTGGCGCCGCTCTCGACCGCGGTAGGCGAAATTCTGCGGTACGTGGTGGAAGCCCCACCTACGTATAGCGCCACGCAACTGCGGGACCTGCAGGACTGGGTGATTAAACCCCACATCCTGGAAGTGCCGGGTGTGGCGGATGTAACCACCTTTGGCGGTCCGCTGAAACAATTTCACATTCTTACAGCTCCCGACCAGTTGCGTAAGTATAACCTGACCATTGCCGACCTGGAAAAAGCCGTACAGGAAAACAACCAGAATACCGGTGGTAACATTATAGAACGCGGCGGACAAGGCTTTGCGGTACGCGGCCTGGGTGCGCTGAAAAAAGAAAGCGACATAGAATCGATCGTGCTGAAATCGGTAAATGGCGTCCCCATTTACCTGAGGGATGTAGCCAGCGTAGAGATAGAGCCGCCGCCACCCAGTGGGGTAATGGGTTATACCATACGCGACGAAGGCATTAATATAACCGGTGGCGTGGAAGGCATTATCCTGATGCGCCGGTACGAAAACCCGACCGATGTACTGAAACTGCTGAAAGAAAAGCTGGTCGATATTAAAGAGAACGAGTTGCCCGAGGGTGTGAAGATACGCCTGCTCTACGACCGCAGTTTCCTGATCGACCACTCGCTGCATACCGTAGGCGAAACCCTGCTGGAAGGGGTAAGTATCGTGATCATCCTGCTGATCTTCTTCTTTGGCAGTGTGCGCAGCGCGCTGGTGGTAGCGCTTACCATTCCCTTTGCACTGCTCTTTGCGTTTATACTGATGCAGATTGCGCATATACCGGCCAACCTGCTTTCGCTGGGGGCGATCGACTTCGGTATTATCGTAGATGGCGCCTGTGTCATGACGGAACACCTGATACGCAAGTACCGGACGGCCACACCGGAAGAGAAGAAGGAAGGCATTGTAAAAATAACCCTGCTGGCTGCCCAGGAGGTAGGCCGCGAGATCTTCTTCTCCGTAGCGATCATTATCCTGGCGTATATGCCCATCCTGCTGATGACCCGTGTAGAAGGCAAACTGTTTTCGCCGATGGCGCTTACCCTCGCCTTTGCGGTAATCGGCAGTATGGTGGCGGCGCTTACCTTTATCCCGGTGCTCATTTCCTTTGCCTACCGCAAAGCGCTCTCCGATCCCGACAAGCCTATGAAGGAGCCCCGCAACGTGGTGCTGCAGTTTATGGAGCGTAGCTATGGCAAAACATTGCATTGGATTATGCGCCGCCCTAAAGCGGTGGTGCTCTCGGGCTTCTCCCTGGTGATACTCCTGATTCTTTTCGGCGCCGGGCTGGGCAGCGAGTTCCTGCCTACGCTCGACGAAGGTTCCATCTTCCTGAGGGGTAATTTCCCGGCCGGGGTTACCATACAGGAGAATGCCAAGAATGCGCCGAAGATCAGGGAGATTATTTCGAAATACCCCCAGATCTCGTTTGTGATTACCCAGAGCGGCCGTAACGACGACGGTACGGACCCCTTCCCGGCCAACCGTAACGAGATACTGGTGGGCCTGAAGGACTACAGCCTCTGGAGCGATACGATCAGTAAGAAAGAACTGGTGCAACGCATTAAAGACGAACTGCAACATAAAATGCCCGCCGTACAGTTCTCCTCCGGTCAGCCGATTATCGACCAGGTTATGGAGATCGTAAATGGTAGTGCGGCCGACCTGGCCATATCGGTGGTAGGCGACGACCTAACGATGATGCGCGAAAAAGCCTATAAGATCGCCGATATCGTGTCGAAGACAACCGGCGCCGATGCGGTAAACATAGAACAGGAGGGACCGCAGGAGCAATTGTCGATCAATATTAACCGGCAAAATGCGGCCCGCTTCGGGATTAACGTCGCCGATATTCAGAACATGATCGAAGCGGCGATCGGTGGTAAGGCCGTTTCTACCCTGTACGACGGCACCAAGAAATATGATATCGTGGTGCGTTACCTACCGCAGTTCCGTAATAATATGGAAGTGATCAAAGACCTACAGGTGCCATCGGCCTCGGGGGCGCTGGTACCCATGAGCGAGCTGGCCGATATCAGTTATGTGGAAGGACAGACCAATATTTATCACTATGGCAGCAAACGTATGATTACGGTACGTACCAATGTGCGTGGCCGCGACCAGAGCGGCTTTGTAAAAGAGGTACAGGAAAAGATCGGCCATGCCGTGAAAGTGCCCAAAGGTTATAGCATTATGTATGGCGGTCAGTACGAGAACCTGGAACGCGCCGGCAAACAGCTGGCCTTTACCATACCGCTTACGATCGTGATGGTATTCCTCCTGCTCTTTGCGTTGTTCCGCCAACTGAAACATACCCTGGTAACGATGAGCTGTATCCTGTTTGCCCTGGCCGGCGGTATTATTGCCCTCTTGTTGCGGGGCTATTACTTCAACGTATCGGGTGGGGTAGGTTTCGTGAGTATTTTCGGCATCAGTGTTATGGCGGGGGTACTGATCGTATCGGCCTTCAGACGGCTTATGTTTAAAGACCACGGTCTGCGCGCCCACGATGTGGAAGAAACGGCCAGGGAGCAATTGCGCGCCCTTTTGTCGATCCTCGTGGTGGCCATCATCGGGCTGTTCCCGGCGGCTATCTCTTCGGGTATCGGTTCGGATGTACAGCGGCCGCTGGCTACGGTAATTATCGGCGGTCTGACGAGCACCCTGCTCTTCGCCCCGGTATTGCTACCGCCGCTGTTTTTCCTGGTCAATAAGGGGAAGCGGGAAGAAAAACCATTAACACCAGAAGACTGA
PROTEIN sequence
Length: 1038
MKNRWVVVGLAIALMGIGFWCFTQLKIEAYPDIADTNVIVVAQYPGRASEEVEQQVTVPIERALQNTPNVMDRRSRTIFGLSVVQLTFKDGTDDYFARQQVMERLQGAELPDGVAPELAPLSTAVGEILRYVVEAPPTYSATQLRDLQDWVIKPHILEVPGVADVTTFGGPLKQFHILTAPDQLRKYNLTIADLEKAVQENNQNTGGNIIERGGQGFAVRGLGALKKESDIESIVLKSVNGVPIYLRDVASVEIEPPPPSGVMGYTIRDEGINITGGVEGIILMRRYENPTDVLKLLKEKLVDIKENELPEGVKIRLLYDRSFLIDHSLHTVGETLLEGVSIVIILLIFFFGSVRSALVVALTIPFALLFAFILMQIAHIPANLLSLGAIDFGIIVDGACVMTEHLIRKYRTATPEEKKEGIVKITLLAAQEVGREIFFSVAIIILAYMPILLMTRVEGKLFSPMALTLAFAVIGSMVAALTFIPVLISFAYRKALSDPDKPMKEPRNVVLQFMERSYGKTLHWIMRRPKAVVLSGFSLVILLILFGAGLGSEFLPTLDEGSIFLRGNFPAGVTIQENAKNAPKIREIISKYPQISFVITQSGRNDDGTDPFPANRNEILVGLKDYSLWSDTISKKELVQRIKDELQHKMPAVQFSSGQPIIDQVMEIVNGSAADLAISVVGDDLTMMREKAYKIADIVSKTTGADAVNIEQEGPQEQLSININRQNAARFGINVADIQNMIEAAIGGKAVSTLYDGTKKYDIVVRYLPQFRNNMEVIKDLQVPSASGALVPMSELADISYVEGQTNIYHYGSKRMITVRTNVRGRDQSGFVKEVQEKIGHAVKVPKGYSIMYGGQYENLERAGKQLAFTIPLTIVMVFLLLFALFRQLKHTLVTMSCILFALAGGIIALLLRGYYFNVSGGVGFVSIFGISVMAGVLIVSAFRRLMFKDHGLRAHDVEETAREQLRALLSILVVAIIGLFPAAISSGIGSDVQRPLATVIIGGLTSTLLFAPVLLPPLFFLVNKGKREEKPLTPED*