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berkeley_reactor_200306_planktonic_scaffold_26454_37

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(40871..41482)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGB4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 203.0
  • Bit_score: 145
  • Evalue 5.00e-32
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 209.0
  • Bit_score: 145
  • Evalue 1.40e-32
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 201.0
  • Bit_score: 152
  • Evalue 4.40e-34

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 612
ATGAACACACCTGTAACCCTTTACCTTGCAGACGACCACCAGATCGTTATCGACGGGCTGAAACTGCTGATCGGTAATGAACCCACGATACGTATTGTCGGTTATGCCAACGACGGTGAAACCGCCTGTACCGAGATCCGTGCCAAACAGCCCGACCTGGCCCTGGTCGATTTCAGTATGCCCGGCCTGAACGGCGTAGAACTGATCCTGTCGCTCAAAAAATCGGCGCCCAATACCCGCTTTGTGATCTTATCCATGTTTGGCAAACCCAACGATATCCGGCATGCCCGGGCCTGCGGGGCCTCCGGTTATATCCTGAAAAGCGTGGATAAAGAAGGCCTGATGAAATGTTTATCGGCCGTATTAAAAGGCAATACGTATTTCCCCGATCTGCTTAACCAGCAGGAAACCGACCGGACCATGTTCACCCCGCGCGAACTCGAAATAATAAAACTGGTCGTGGAAGGATGCTCGACCGCCGATATTGCCGCACGACTCTCCCTGAGTCAGCATACGGTAAATACCCACCGGAAAAATATAGGACGAAAAACCAATAGCAGCAATGCACTTGGCCTGATCAAGTTCGTCCAGGAAAACCAGATCGAACTTTAA
PROTEIN sequence
Length: 204
MNTPVTLYLADDHQIVIDGLKLLIGNEPTIRIVGYANDGETACTEIRAKQPDLALVDFSMPGLNGVELILSLKKSAPNTRFVILSMFGKPNDIRHARACGASGYILKSVDKEGLMKCLSAVLKGNTYFPDLLNQQETDRTMFTPRELEIIKLVVEGCSTADIAARLSLSQHTVNTHRKNIGRKTNSSNALGLIKFVQENQIEL*