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berkeley_reactor_200306_planktonic_scaffold_26454_114

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(122879..123244)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Pontibacter roseus RepID=UPI0003676994 similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 119.0
  • Bit_score: 156
  • Evalue 1.30e-35
Response regulator receiver protein {ECO:0000313|EMBL:EJF11089.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 119.0
  • Bit_score: 155
  • Evalue 3.10e-35
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 118.0
  • Bit_score: 144
  • Evalue 1.10e-32

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Taxonomy

Pontibacter sp. BAB1700 → Pontibacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 366
ATGAAGAAAGTGCTTGTCGTAGACGATGACCCCTATATCCTGATGTCCGTTGAATTCCTGATGAAGAAAAACGGCTATGAGGTGATGGTTGCCCGCAACGGGGCGGAGGCTATGGCTTTCCTGGAAGCCAGCAAGCCCGACCTGGTATTGCTCGATATCATGATGCCGGATGTAGACGGTTATTCCATTTGCCGGCATATCAAGGCTACGCCCGCACTCGAAGATATTATCGTGGTCTTTATAAGCGCTAAGACCGCCGAAGCCGATATCCGCGAAGGATACGACCTCGGCGCTGCGCTATATGTCAGCAAACCCTTCTCTACCCGCGACCTGATGAAAAAGATCAACGGTTTATTACAGGCCTAA
PROTEIN sequence
Length: 122
MKKVLVVDDDPYILMSVEFLMKKNGYEVMVARNGAEAMAFLEASKPDLVLLDIMMPDVDGYSICRHIKATPALEDIIVVFISAKTAEADIREGYDLGAALYVSKPFSTRDLMKKINGLLQA*