ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_26454_244

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 250855..251559

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ESQ7_EMTOG similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 232.0
  • Bit_score: 249
  • Evalue 2.80e-63
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 232.0
  • Bit_score: 249
  • Evalue 8.00e-64
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFK02710.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 232.0
  • Bit_score: 249
  • Evalue 3.90e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 705
ATGCCAATTGCTGTTGTTACCGGCGCTACCAAAGGTATCGGAAGGGCTATTGCCGAAAAATTGTTACAGGAAGGATTTGACCTGGCCGTATGTGCCCGTACCGAAACAGACCTGCTGGATTGCAAAGCAATATGGACCCGCGACTTTCCCGGTCGCCGGATATGGACAAAGGCTACCGATATGCGCGACCAGCAACAGGTAAAAGACTTTGCAGCGATGGTATTGGAAACCGGTGTCGCGATAGCCCTGCTTGTTAATAACGCGGGCCTGTATTTTCCCGGTAACCTGGCCACTGAACCCGAAGGCCAGCTGGAAAGCCTTTTGGCCACCAATTTGCTTAGCGCTTATCATCTTACCCGTGCATTATTACCCGTTATGAAAGCGCAAAAAGCTGGTCATATCTTTAATATGTGTTCGGTGGCTTCGCTGCAGGCTTATCCTAATGGCGGCGCTTACAGCATTACCAAATATGCATTACTGGGTTTCTCCGATAACCTGCGTTACGAACTGAAAGACGAAGGCATTAAAGTAACCGCGATAAGCCCGGGGGCCGTATGGAGCAATAGCTGGAGCGGCAGTGGTGTACCGCCCGAAAGAATTATGAAAGCAGAAGATATAGCAGCATTGCTCTGGACGACCTATAGTCTCTCGGCCCAGGCCACGGTAGAGCATATCGTATTGCGGCCGCAACTGGGCGATCTTTAA
PROTEIN sequence
Length: 235
MPIAVVTGATKGIGRAIAEKLLQEGFDLAVCARTETDLLDCKAIWTRDFPGRRIWTKATDMRDQQQVKDFAAMVLETGVAIALLVNNAGLYFPGNLATEPEGQLESLLATNLLSAYHLTRALLPVMKAQKAGHIFNMCSVASLQAYPNGGAYSITKYALLGFSDNLRYELKDEGIKVTAISPGAVWSNSWSGSGVPPERIMKAEDIAALLWTTYSLSAQATVEHIVLRPQLGDL*