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berkeley_reactor_200306_planktonic_scaffold_32010_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(16208..17404)

Top 3 Functional Annotations

Value Algorithm Source
Lanthionine synthetase C family protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0L7_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 383.0
  • Bit_score: 209
  • Evalue 3.20e-51
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77423.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 344.0
  • Bit_score: 299
  • Evalue 4.30e-78
Lanthionine synthetase C family protein similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 383.0
  • Bit_score: 209
  • Evalue 9.10e-52

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1197
ATGATAGCAGCTATACGGAATAAACACGACCAGATCGTAAAAGCGGTAACCAGCTTCCTTACACAACAGGAAGCGCCGGTGTATTGGGGATTGGCCAATGGCCGTACCGGCGCTATGTTGCACCTTTTGTATGCGCATAAGCACGGGCTCCTTACCGACTTCGAACCCTTTGAAGCTGCGGCCCAGGAGCTGAGTGGCATTGGCCTGCAGGATGTCGATTTTAGTTATGGTATGGGAAAGGCCGGTCTGAATTGGTTTTACCAGCTTATGTTCCGGCACGAATTGCTCGACCAGGAAGATACCGATCTGCTTTGTTTTGATGACGATTACCTGGAAAGCTTTTCCCTTGCGGCTTTGGAGGCGGGTAATTACGATTACCTGTATGGTGGACTGGGGGCAGCGGCCTACCTGTTGTACCGGCATGGTGCGCAAAAGAAAGACTTCATGGCCCGTGTGCTGGCCATGCTTACGGAGCGGGCAAGGGCTAATCATGGCGCCCTGCCTGCCTTTCAGCTTATGGAGCAACGGCCGGTTCCCGAAATGGTTAACCTGGGCCTTGCCCACGGCCTGCCGGCGGTGATCCGCTTTTGCCTGCTTTGTGATACACAGGATGTTTGCCGCGAAGCGAGCCGGTCGCTGGCATTGCAGCTTATCCGTTATATGCGGGCCCAGGTGCGGGCGGATAAAGACACTTGTTACTTTCCTTCTGTGGTGGAAAAAGGTAAACCTGCAGAGCAGGATACCAGCAGGCTGGGCTGGTGTTACGGCGACCTGGGTATCGGCTTTGTCCTGTACGAAGCGGGCAGGGTATGGGCCGATGATGAATTAACTGCTTTCGCCCTGGAGGTATTGGTGCATACGACACAGCGCAGAGCCAATGCGCAAACCCTGGTACACGACGCGGGTTTTTGTCATGGCAGTGCCGGTATCGCTCATATTTACAATCGCCTGTGGCAATTATCACAGCTCCCGGTGTTTCGCGAAGCGGCCGATTACTGGATGGGCGAAACCCTGCGCCTGGCGCAGCATGCCGATGGTGTAGCCGGTTATAAAAAATGGGATGCCGCCAGTAACAGCTGGGTAGTTGACTACAGCCTTATTGAAGGTGTGGCCGGTATCGGCCTGGTGTTAATCAGTTATCTTACCGGCGATTGCTCCTGGGATTACAGTGTGATGTTGTCCGATGGTTACAGCTAG
PROTEIN sequence
Length: 399
MIAAIRNKHDQIVKAVTSFLTQQEAPVYWGLANGRTGAMLHLLYAHKHGLLTDFEPFEAAAQELSGIGLQDVDFSYGMGKAGLNWFYQLMFRHELLDQEDTDLLCFDDDYLESFSLAALEAGNYDYLYGGLGAAAYLLYRHGAQKKDFMARVLAMLTERARANHGALPAFQLMEQRPVPEMVNLGLAHGLPAVIRFCLLCDTQDVCREASRSLALQLIRYMRAQVRADKDTCYFPSVVEKGKPAEQDTSRLGWCYGDLGIGFVLYEAGRVWADDELTAFALEVLVHTTQRRANAQTLVHDAGFCHGSAGIAHIYNRLWQLSQLPVFREAADYWMGETLRLAQHADGVAGYKKWDAASNSWVVDYSLIEGVAGIGLVLISYLTGDCSWDYSVMLSDGYS*