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berkeley_reactor_200306_planktonic_scaffold_44244_122

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(125667..126488)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSZ3_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 268.0
  • Bit_score: 353
  • Evalue 1.60e-94
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 268.0
  • Bit_score: 353
  • Evalue 4.60e-95
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU03554.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 268.0
  • Bit_score: 353
  • Evalue 2.30e-94

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 822
ATGATACTACAAGGCAAAAACGCAATTATTTACGGAGCGGGCGGCTCCCTTGGCGGCGCTGTAGCAAAAGCACTTGCTGCAGCCGGCGCGCATGTATTCCTTACCGGTCATCATCTTCCCGGCGTAAACATAACGGCGGATATCATTAAGGCGGCAGGTGGCAAAGCATCCGTTCATGAGGTCGATGCAAGAAGTGAAAAATCGGTCAATGATCATATCCATACCGTCATGCAAACGGCAGGCGCCGTCGACATATCTTTCAATGCTATAGGCTGGAAGGATACACAGGATATCCCGTTAACGGATATGACCCTCGAGGACTTTCTCCGCCCGGTAACGATAGCCATGGAGACCCAATTTATAACCGCCACCGCAGCAGCCAGGGCGATGAAAACACAGCAATCCGGTGTTATACTTTCGCTTACCGCAACGCCGGGGGGCATCGGTTATGCAAATGTAGGCGGCTTCGGTCCTGCATGCAATGCCGTAGAAGGCTTTTCAAGGAATCTTGCAGCGGAATTAGGCCCCTATGGTGTTCGTGTTGTCAATATCCGTTCCGCCGGTTCGCCGGATTCGAGGATCTTTAAAGAAGCCATAGCAGCGGGTGGCGAAGCGGTGGAGGCATTTATCGGGAAGATGAAAAACGATACGATGCTTAAACAGTTACCGCTAATGGAAGATATCGCGAACACAGCGGTATTCCTTTCCTCTTCCATGGCCGGTAAGATAACCGGCGTTACGATTGATGTTACTGCGGGCACCACAGGCGCATTAAATTATAAAGTAACAAACGTCGCGTTCTTGAAAGATCAAGCCTCGTAA
PROTEIN sequence
Length: 274
MILQGKNAIIYGAGGSLGGAVAKALAAAGAHVFLTGHHLPGVNITADIIKAAGGKASVHEVDARSEKSVNDHIHTVMQTAGAVDISFNAIGWKDTQDIPLTDMTLEDFLRPVTIAMETQFITATAAARAMKTQQSGVILSLTATPGGIGYANVGGFGPACNAVEGFSRNLAAELGPYGVRVVNIRSAGSPDSRIFKEAIAAGGEAVEAFIGKMKNDTMLKQLPLMEDIANTAVFLSSSMAGKITGVTIDVTAGTTGALNYKVTNVAFLKDQAS*