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berkeley_reactor_200306_planktonic_scaffold_82142_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(5244..6440)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036DAAE2 similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 396.0
  • Bit_score: 430
  • Evalue 1.50e-117
Putative RND-type efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO41854.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 403.0
  • Bit_score: 468
  • Evalue 9.20e-129
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 398.0
  • Bit_score: 417
  • Evalue 3.80e-114

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1197
ATGCGAAACCGCGTCCTGAAAGTAACCGTATTGTCCTCACTGGTCCTGCTGCTGGCAGCTTGTGGCGGTAAGGCCAAAAAAGATCCGCTCACCGAAAAAAGGGCGGAGCTCGAAAAACTCAAAGCCGAGCAGAAAACCCTGACCGAAAAAGTAGGCGCTTTACAGGACGAGATCGATAAGCTGGATCCGGCATCGGCCAATGCTAATGCCAAACTGGTTAGCATCAGGACCATCGGCCCAGGCGCCTTCAACCACTTTATCGACCTGCGCGGTAAGATCGATGCTTATAACGTGGCCAATATAGCGCCCCGTGGCCAGGGTGGCTTCGTAAAAGAAGTCTACGTAAAACAGGGCGACCTGGTTAAAAAAGGCCAGGTATTGCTGAAGCTCGACGATGCCGTACTCCGCCAGAGTCTTGCCGCAGCGCAACAGCAGCTTAGCGGCGTAAAGGCCCAGCTCGACCAGGCGCAAAGCATCTACCAGCGTCAGCAAAATCTTTGGAAACAAAATATCGGTACCGAAATCCAGGTGCTGAATGCCAAAACGAATATGGAAGCCCTGCAAAGCCAGTATAATGCGGCTAAAGCGAATATAGGCCTGGCCCAGGAGCAGGTAAACACCACCAATGTCGTTTCCGAGATAAGCGGCGTGGTAAACACCGTAAATGTAAAGGTGGGCGAATTCTTTAATGGTGCCCAACAGATCCAGGTGGTCAACAACAACGATCTGAAGGTAACCGTAAACGTACCGGAGAACTACCTCGACCGCGTAAAGCTGGGTAGCACGCTGATGGTAACCCTGCCCGAATCGGATAATAAAACCATAACGACCAAAGTAAATGTAGCCGGTAAACTGATTGACCCCATTACCCGTTCGTTTTATGTAGAGGGTAAGATCCCGCTGGATAAAGACATCCGCGCCAACCAGATGGCGATGGTACGGATCGAAGACTATGCCGTGCCCGATGCGATTACCATACCGGTTAATACCCTGCAGACGGATGATAAGGGCAAGTTTGTGCTGGTAGCAGTAGAAGAAAAAGGCAAGCTGGTAGCCCGGAAGAAACCCGTTGAGATCGGCCAGTTGTACGGCGATCAGTTAGAAGTAAAAAGTGGTCTGACTGCCGGCGATAAGATTATTACCGAAGGCTTCCAGAGCCTGTATGATGGTCAGCGTATCACGCTTGCCACGATGTAA
PROTEIN sequence
Length: 399
MRNRVLKVTVLSSLVLLLAACGGKAKKDPLTEKRAELEKLKAEQKTLTEKVGALQDEIDKLDPASANANAKLVSIRTIGPGAFNHFIDLRGKIDAYNVANIAPRGQGGFVKEVYVKQGDLVKKGQVLLKLDDAVLRQSLAAAQQQLSGVKAQLDQAQSIYQRQQNLWKQNIGTEIQVLNAKTNMEALQSQYNAAKANIGLAQEQVNTTNVVSEISGVVNTVNVKVGEFFNGAQQIQVVNNNDLKVTVNVPENYLDRVKLGSTLMVTLPESDNKTITTKVNVAGKLIDPITRSFYVEGKIPLDKDIRANQMAMVRIEDYAVPDAITIPVNTLQTDDKGKFVLVAVEEKGKLVARKKPVEIGQLYGDQLEVKSGLTAGDKIITEGFQSLYDGQRITLATM*