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berkeley_reactor_200306_planktonic_scaffold_82142_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 29047..29757

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 240.0
  • Bit_score: 314
  • Evalue 7.70e-83
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GHV4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 240.0
  • Bit_score: 314
  • Evalue 5.50e-83
yraL; methyltransferase similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 224.0
  • Bit_score: 312
  • Evalue 7.70e-83

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 711
ATGAAATTGTATCTGGTGCCCACCCCCATCGGCAACCTTGCCGACATTACCCTGCGTGCTCTGGACATCCTGAAGCAGGCAGATGCGGTGCTGTGCGAAGATACCCGTACGAGTGGCTTTTTGCTGAAACATTACGACATCAAAAAGCCACTCTACGCTTACCACCAGCATAACGAGCATAAAGTGCTGGAACAGCTGATCGGCCAGTTGCAATCGGGCAAGACCCTGGCCCTGCTGACCGATGCGGGCACACCCGGCATCTCCGACCCCGGCTACCTCTTGTTACGCGAGTGTCTGAAACACGACATCCCCGTGGAGTGCCTGCCCGGCGCCACCGCCTTTGTACCCGCCCTGGTACAGAGTGGCCTGCCCGGCAACAGTTTCGTATTCGAAGGTTTCCTCCCCCTGAAAAAAGGGCGAAAAACCAAGCTGGAACAACTGGCTACAGAACCCCGCACCATTATCCTTTACGAATCGCCGCACCGCCTGGCCAAGACGCTGGAGGAAATGAAGACCTATTTCGGCCCCACACGCCAGGCAGCGGTAAGCCGCGAACTGACCAAAATGTTCGAAGAGACCCGCCGTGACACCCTGGAACAACTGGCGGCGCACTATGCGTTGCACGCGCCTAAAGGCGAGATCGTGATCGTGATCGAAGGTCACCAGCCGGTATCCAAAAAGGCTTCCTACAAAACGGAAGAAGAGGACTAA
PROTEIN sequence
Length: 237
MKLYLVPTPIGNLADITLRALDILKQADAVLCEDTRTSGFLLKHYDIKKPLYAYHQHNEHKVLEQLIGQLQSGKTLALLTDAGTPGISDPGYLLLRECLKHDIPVECLPGATAFVPALVQSGLPGNSFVFEGFLPLKKGRKTKLEQLATEPRTIILYESPHRLAKTLEEMKTYFGPTRQAAVSRELTKMFEETRRDTLEQLAAHYALHAPKGEIVIVIEGHQPVSKKASYKTEEED*