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berkeley_reactor_200306_planktonic_scaffold_90435_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(3520..3774)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BAB1B similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 99
  • Evalue 9.90e-19
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:KGE13043.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 63.0
  • Bit_score: 99
  • Evalue 1.80e-18
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 63.0
  • Bit_score: 98
  • Evalue 6.20e-19

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 255
ATGATATTATTGATCATATTTTTTCCTTACCTTTGCGCTTTATTAATTTTTATTTTGTTTAAAATGCAAGAAGGTACAGTAAAATTCTTCAATGTTACCAAAGGATTTGGTTTCATTACACCTAACGATGGTAGCCAGGATGTTTTCGTTCACATTTCTGATCTCGCTGGCGAGATCCGTGAAAACGATAAAGTATCCTATGAAGTACGCAATGGTAAAAAAGGTCTGAATGCAGTGAACGTAAACGTTCTCTAA
PROTEIN sequence
Length: 85
MILLIIFFPYLCALLIFILFKMQEGTVKFFNVTKGFGFITPNDGSQDVFVHISDLAGEIRENDKVSYEVRNGKKGLNAVNVNVL*