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berkeley_reactor_200306_planktonic_scaffold_90435_24

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 19334..20029

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036DCD9D similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 170.0
  • Bit_score: 85
  • Evalue 5.30e-14
Uncharacterized protein {ECO:0000313|EMBL:GAO31130.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 24.9
  • Coverage: 229.0
  • Bit_score: 87
  • Evalue 2.60e-14

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 696
ATGAAAACAGTAGTAGTGGCCGGTATCCTGGCCATAACAGCGGCATCTGCTGCCGCGCAGGTAACCCTCGCCCCCGAAGTAGGGGCTATTTTGTATAACCAGACAGCCAAGGCCACAACAAATGGTCGCTCCATGACGAAGTCGAACAGTTTCGAGCCTGGTTTACGAGCCGGAGCCCTGGTCGATCTGGGTATTTCAGAACACTTTTCGGTACAACCCGGTGTTTTTTATGTTTTAAACCGGACGACACGCCGTGATAAGGTGTCGGGCGGCGGAGCCAACTTTAATAGTTCGACTTCCCTAACGGTGCATGCAGTCCAGGTGCCGGTTTATGCCGTGTATAAGACGGGTACGGAAGGCAGCGGCCGCTTCTTTGCGGGGCTCGGCGGTTATATTACATATCATATTGCAGGCTCCAGGAAGTTTGAAGGACCTAATGCTGGCGGCGGTATCGGCGTTCGGTTAACCAGGAGTATGACGTTCGGGGATAACCAGATAGATGATCTGCGCAGACTGGATTTCGGCCCGGCGGCCATGCTGGGTTATCAACTGGCCAACGGCCTTTATATTAAAGGACAGTACCAGTATGGACTGGCGAATATGCAGCCCATTGGCAACAGTAATTTTTCTATTAAGAGTATGAGTTTCGGGTTGTCGGTGGGGTATAGCTTTGGTCGTTCCGGCGGCTGGCGATAA
PROTEIN sequence
Length: 232
MKTVVVAGILAITAASAAAQVTLAPEVGAILYNQTAKATTNGRSMTKSNSFEPGLRAGALVDLGISEHFSVQPGVFYVLNRTTRRDKVSGGGANFNSSTSLTVHAVQVPVYAVYKTGTEGSGRFFAGLGGYITYHIAGSRKFEGPNAGGGIGVRLTRSMTFGDNQIDDLRRLDFGPAAMLGYQLANGLYIKGQYQYGLANMQPIGNSNFSIKSMSFGLSVGYSFGRSGGWR*