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berkeley_reactor_200306_planktonic_scaffold_90435_26

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(21257..21907)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B70D71 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 215.0
  • Bit_score: 235
  • Evalue 3.90e-59
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 214.0
  • Bit_score: 231
  • Evalue 1.20e-58
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU62905.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 214.0
  • Bit_score: 231
  • Evalue 6.00e-58

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 651
ATGGCTATCATTCAATACATTATTGCAGACGATCACAAAATATTCAGACAGGGTCTTAAAATGATCCTGGCCGACGACCACAAGATCAGGTGTACGGGCGAAGCGGCGCATGGCAAAGAACTGCTGGGTCTGTTGGAGCAGACCCAGGCCGATGTGATTTTACTGGACCTTAAAATGCCGGAGATGGACGGACTGGAAGTGCTCCGGGAGATCCGCGGCCGCTACGAAGACCTGAAAGTAATCGTATTGACGATGTTCGACGACGAACACTTTATCCTGCATATGATGGAAGCCGGCGCCAACGGCTACCTGCTCAAAAATGCGGAACCGGCAGAGATTAAGAATGCCATTCATGCCGCGGTCGAAAACGGCTATTACTTCAACGACCTGGTCAATACCGTAATGCTGAAAAAGATTGTGGAACAAAACAAACGGACACCAAAATTCAAAGAAGAGATCAGGCTGAATGAAAAGGAGACCGAGATCCTGAAGCTCATCTGCCAGGAACATACAGCCGCGGAGATCGGCAAAAAGGTATTCCTCAGCACCCGCACCGTAGAAGGTATCCGGTCGGTACTGCTCGAAAAGATAGGCGTACGCAATACCGCCGGCCTGGTTATGTATGCCGTAAAAAACGGGATCGTAACCTGA
PROTEIN sequence
Length: 217
MAIIQYIIADDHKIFRQGLKMILADDHKIRCTGEAAHGKELLGLLEQTQADVILLDLKMPEMDGLEVLREIRGRYEDLKVIVLTMFDDEHFILHMMEAGANGYLLKNAEPAEIKNAIHAAVENGYYFNDLVNTVMLKKIVEQNKRTPKFKEEIRLNEKETEILKLICQEHTAAEIGKKVFLSTRTVEGIRSVLLEKIGVRNTAGLVMYAVKNGIVT*