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berkeley_reactor_200306_planktonic_scaffold_90435_33

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 29201..29878

Top 3 Functional Annotations

Value Algorithm Source
iron-dependent repressor n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6CF2A similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 217.0
  • Bit_score: 231
  • Evalue 5.80e-58
Putative DtxR family transcriptional regulator {ECO:0000313|EMBL:GAO42654.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 219.0
  • Bit_score: 243
  • Evalue 2.70e-61
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 216.0
  • Bit_score: 233
  • Evalue 4.30e-59

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 678
ATGTCCGACTTAAGTTTTACAGAAGAGAATTACCTGAAAGCGATCTACTACCTGCAACAGGAAAGTGCAACCCAGGATGTGTCTGTAAACGAGATCGCAGAAAGAATGAGCACCCGGCCGGCCACGGTAACGGACATGCTGCGTAAACTCTCGGAAAAAAAACTGATCCATTACGAAAAATATAAAAAGACCCGGCTGAGCAAAACCGGCGCCGGTAACGCTTTACAGATTATCCGTAAACACCGGCTCTGGGAAGTATTCCTCCACGAGAAGCTGAAATTCTCCTGGGACGAGGTGCATGTGGTGGCCGAAGAGCTGGAGCATATCCGTTCTGCACAATTGATAGAACGGCTGGACGAGTTCCTGGGATTCCCGCGTTTCGATCCGCATGGCGACCCCATACCCAATGCGGCGGGCGAGATTATGCCGGCCTCCAACACGACCCTGGCCGAATCGGAGCCGGGTAAAAAACTCAAGCTGGTAGCGGTAAAAGATACCTCTTCGGCTTTCCTCCAACACCTGGAACGCTTCGGGCTGCATATCGGTATTGCCTTACTGGTAAAGGAGCAGTTGCCTTTCGATAAGAGCGTGATGGTGGCGATCGGGAATAACGATCCCGTAATGCTTTCCGAAAAAATAGCCGTCAACCTGCTTGTCGTGGAAGCCGGTAAAAAATAA
PROTEIN sequence
Length: 226
MSDLSFTEENYLKAIYYLQQESATQDVSVNEIAERMSTRPATVTDMLRKLSEKKLIHYEKYKKTRLSKTGAGNALQIIRKHRLWEVFLHEKLKFSWDEVHVVAEELEHIRSAQLIERLDEFLGFPRFDPHGDPIPNAAGEIMPASNTTLAESEPGKKLKLVAVKDTSSAFLQHLERFGLHIGIALLVKEQLPFDKSVMVAIGNNDPVMLSEKIAVNLLVVEAGKK*