ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_165714_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 10682..12580

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT29_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 646.0
  • Bit_score: 406
  • Evalue 2.80e-110
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 646.0
  • Bit_score: 406
  • Evalue 8.00e-111
Uncharacterized protein {ECO:0000313|EMBL:ACU59068.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 646.0
  • Bit_score: 406
  • Evalue 4.00e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1899
ATGGGCACGATCACCAATCTTTACAGCTGTCCCTCCTGCGGCCGCAGTTTGGCCTTTGGCAATACCGTCAACAATATAGCTGCCTGCACCTGCGGTTCGGTGAGCCAACTTTATAACGGTAAACCCGAAAGCATTTTCCTGCCCATTATCAACCCCGGTGAGGATTATATCCAGCCCGGCACTACCGGTACATGGAACGGTAAGACCTTTATCGTAACCGGCAGGTTCCGCGCCTGGTTTGAAGAAACCGCCTTTAACTACTGGAGCATCGATATGGGCGATGAACGCAGCTGGTACCTGGGCGAAGGTTATGGACTGTATGCTATTTACGAACTCAGGGAATCGGCGATCATCGACCGCCACGTCCTGAACGGGATGAAAGGCTCGGGGCGGATCATGCTGGAAGTGAACCAGTCCTATGAAATGACGCGGCGTAATAATGGCACGTATATCGATATAGAAGGCGCCTTTTATAAACCCGGCGGCACGCAAAAGGTATCCACCTACGAATGCTCTGGCGGCATCAAGAAAGTGGAAATTTTCGAGTATGCGCCGGACGAGATAGAAGTCTATACCCTGCACCCGGCCGACGTTACGGCCTTAAACCTGCAACATACCCGCGATGTAGCGCGAACCGGTAAAAGCTTTACCTGTAAAACCTGCGGCGTTATCACGACGGTTAAGACCTATCCCTACGCACAAAGCTGGGTATGCAGTTGCGGCGACCGGTACAGCCTGCAACATACAAGCCAGGCTAAACGTGCGGCCGAGAACAGCATCCATACCGCCCAGCCCTATTTCGTACTGGGTAGCGCCGTTGAGCTGTCCGGCATTACTTATACCGTAATCGGGTTTGCCTCCAAAGTAGACAGCAGCAACAGTTCCGAAACCTGGCGGGAATATACCTTGTACGATCAGGTACAGGGTTATGCTTTCCTCAACGAATCGGAAGGCCACTGGATGTTGCTCCGCGAAATGCAGGAGACGCCAAGGGTTGAAGATGCGAAGAAACACGCCTTCTATTATAACAACAAGGGATTTGAAATCTTCCTGCAGTACCGCTCCCGCATCCTGTACGCCCTGGGCGAATTTCCAGGTAATGTATTTAACGATGAATATGGCGCCACCGCTACCGACTTCATATCCCAACCGGATATATGGAGCGTGGAACAACACCGCGACGAGGGAATGACCTGGTACTACGGCCGGTATATAGACAAAAGCATACTCCGGAAACAGGCGACCTGGCTGCCGTATACGCGCGGTATAGCACCCGCGCAGGAAAAGATGCGGGCCGATGCGCCTTCGATCATCCAGGCCATGCTGGTGGTACTGGCGCTATTCTTCCTGGTGCAGGTGGCGACCGTTTCGACCAATGCAGAAAAAGAGATCCTGGATACCAGTTTTCAGCTATCCGACTCGACCGTTACCCAGACCTTTATATCAGATACCTTTAAGCTTACGAAATGGAAGAGCAACCTGGAGTTCGAGATTGCCGCCCCGGTAGACAATACCTGGTTTGAGCTGAATGCGACCCTGGTGAATGCGGGTACCGGTGATGAATACAGCCTGGAACAAGGTATCGAATACTACCATGGCATAACCGACGGGGAAAGCTGGGCCGAAGGTTCGACCCGCGAAAATGCTTACCTGAGCAGCATTCCGGCGGGCACCTATTTCCTCCAGATCAGCAGTTCGCGGGATATGAATATCACTTTGGACAATACCGTAAAGGAATTCAGGCTGCGGGTAACCAACGACAGCCCCATGTACCGCAACTTCTGGCTGGTCGGACTAATCATTATCATATGGCCGGTCATCATGCTGATCATGAATTATTATTACGAAAGGGAAAGATGGCGTGCAAGCCCCTATTCTACGTTTACCTACGAAAAATAA
PROTEIN sequence
Length: 633
MGTITNLYSCPSCGRSLAFGNTVNNIAACTCGSVSQLYNGKPESIFLPIINPGEDYIQPGTTGTWNGKTFIVTGRFRAWFEETAFNYWSIDMGDERSWYLGEGYGLYAIYELRESAIIDRHVLNGMKGSGRIMLEVNQSYEMTRRNNGTYIDIEGAFYKPGGTQKVSTYECSGGIKKVEIFEYAPDEIEVYTLHPADVTALNLQHTRDVARTGKSFTCKTCGVITTVKTYPYAQSWVCSCGDRYSLQHTSQAKRAAENSIHTAQPYFVLGSAVELSGITYTVIGFASKVDSSNSSETWREYTLYDQVQGYAFLNESEGHWMLLREMQETPRVEDAKKHAFYYNNKGFEIFLQYRSRILYALGEFPGNVFNDEYGATATDFISQPDIWSVEQHRDEGMTWYYGRYIDKSILRKQATWLPYTRGIAPAQEKMRADAPSIIQAMLVVLALFFLVQVATVSTNAEKEILDTSFQLSDSTVTQTFISDTFKLTKWKSNLEFEIAAPVDNTWFELNATLVNAGTGDEYSLEQGIEYYHGITDGESWAEGSTRENAYLSSIPAGTYFLQISSSRDMNITLDNTVKEFRLRVTNDSPMYRNFWLVGLIIIIWPVIMLIMNYYYERERWRASPYSTFTYEK*