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berkeley_reactor_200306_planktonic_scaffold_165714_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(19049..19591)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Niabella soli DSM 19437 RepID=H1NSC6_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 169.0
  • Bit_score: 234
  • Evalue 7.20e-59
cyclic nucleotide-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 169.0
  • Bit_score: 234
  • Evalue 2.00e-59
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AHF16668.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 169.0
  • Bit_score: 234
  • Evalue 1.00e-58

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGCACAAAGGCCCTGTTTTTCCATCTCACGAATGGCATAAGTATATCCACCTTTTTAAAAGGCTCGAAGTGCCTGCCAAAACGGTATTGCTGCAGGAAGGCGATATTTCGAAAAGAGCCTTTTTTGTATTGAAGGGGTGCCTGAGGGTTTGCTTCAACAATAAAGGGCGCGATATTACCACACAGTTCTTTTTTGAAGGTCAGGGTGTGGCGGCTATAGAAAGCTTCCGTACCGGTAAGCCCAGCCTCTTTGGTATCGAAGCCATCGAACCCTCCCTGCTCTATGTACTTGCCAAAAAGGATTACGAGTTCATCACCGAACAATCGCCGGCCATCAGGACTGAAATCGAACACCATGTCTTTAACCGGCTCCTGTCCTACCAACACCTCTTTATCTCGCGGATCAAAGACAGCCCGGAAGAGCGCTACCACGATCTTGTCGCGCATCATCCCGATATACTTAAACGTATTCCGCAGCATTATATCGCCTCTTACCTCGGTATTACGCCCGTATCGCTGAGCCGTATCCGTAACCGCCGTTAG
PROTEIN sequence
Length: 181
MHKGPVFPSHEWHKYIHLFKRLEVPAKTVLLQEGDISKRAFFVLKGCLRVCFNNKGRDITTQFFFEGQGVAAIESFRTGKPSLFGIEAIEPSLLYVLAKKDYEFITEQSPAIRTEIEHHVFNRLLSYQHLFISRIKDSPEERYHDLVAHHPDILKRIPQHYIASYLGITPVSLSRIRNRR*