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berkeley_reactor_200306_planktonic_scaffold_199644_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 120..1685

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000311D429 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 514.0
  • Bit_score: 577
  • Evalue 1.30e-161
MS156, putative transposase {ECO:0000313|EMBL:AAK62878.1}; TaxID=155537 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla sp. PRE1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 510.0
  • Bit_score: 587
  • Evalue 1.40e-164
transposase, is4 family similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 508.0
  • Bit_score: 562
  • Evalue 9.40e-158

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Taxonomy

Microscilla sp. PRE1 → Microscilla → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1566
TTGTGGCCATTAGGTATGGCTAGAGGCAAAACCCTGTCGGTGGTGTTCAAGGCCAACCACCAACATCAACTAATGGCCTTACCGCCCAGTTTGGACGAGTTGATTGGGTCAGATCACCCGGTTCGGGTAGTACACGAAGTGCTGGAGAAGGTGGATATCACCTTGTTGATGAAGCAGTACAAGCCAGGAGGAGCCAGCAGCTATCATCCCCGGATGCTGCTCAAAGCGTTGGTATACGCCTATATTAATAACATTTATAGCAGTCGGAAGATAGAGCAGGCCTTACAAGAGAGCATTTATTTTATGTGGCTCACCGGCATGAGCAAGCCGGATCACAATACGATCAATCGGTTCCGGGGGCATCGGCTGCAAAAGACGTTACAACCTATTTTTACCCAGGTCGTACTGTTGTTATGCGAAGAGGGCTTACTGAGCCTAAAGGACCTGTATACGGATGGCACGAAGATCGAGGCCAATGCGAACCGGTATACGTTTGTATGGGGCAAAGCGATCAAAACGAGCAAGGAGCGGATCAAACAGCAGTTGGATGAGCTCTGGAAATATGCGCAGTCGGTGTCGGCGTGCGAGTGGGATGACACCGACCCATCGGGCTTTAAAAAGATCGACAAAGAAACCGTAACGGCCACGGTGGACAAGATCAATGCTGCTTTGCGGGACAAGCCGGTTAGCAAGGAGGTGCGGCAAAAGTTAAACTATGCGCGCAAGCACTGGCCGGCTGTGCTAGATAAATATGAACAGCAGGAAAAGGTGCTGGGCACTGGTCGCAACAGCTACAGTAAGACGGACCCGGATGCCACCTTCATGCGGATGAAGGAGGACCACATGCGCAATGGTCAGTTAAAGCCGGGCTATAATCTACAGATCAGCACCAACCACCAATACATTGCCTCCTACAGTATCCATCAAAATCTGGCTGATATAAACACCCTTATCCCTCATGTTCAACAGCATATCAAGGCAGTAGGAATCAAGCCCAACAATATTACGGCGGATGCTGGCTATGGCAGCGAGCAGAACTATCAATGGCTGGAGAAAAGGAGGATCACCGCTTATGTGAAACATGCTCGTTTTGACCGAAACCAACGTAAACAGCAGCGCGACAAAAACCCGTACGGAGTAGATAAGTTCCGATATGACGAACAAACAGGTCGGTATAACTGTCCGGCAGGCAAGCCGATGAAAAAAATAGATAGGGAGGTCAAGACGAACAAGACAAAATCAGGCATCGCTCAAACGCTCACGTATTACCAGGCCAAAGACTGTGCCCGCTGTCCTTTACGCAAACTGTGCCATCCGCAACCAGGCAACCGCATTATTGAAGTCAATCATAACTTGAACCGCCTGCGACAACAGGCGGATAAACGGCTGCTAACCAAACGGGGCATCCAAAAAAGAAAGCAACGCTGCTTCGATACCGAACCGGTCTTTGCCAATATTAAATACAATCATCATTTTAAGCGCTTTATGCTCCGGGGCATCGATAAGGTGATGGTGGAAACCGGGTTGTTGGCCCTGGCACACAATCTGAGAAAGAAAGCAGCCTGA
PROTEIN sequence
Length: 522
LWPLGMARGKTLSVVFKANHQHQLMALPPSLDELIGSDHPVRVVHEVLEKVDITLLMKQYKPGGASSYHPRMLLKALVYAYINNIYSSRKIEQALQESIYFMWLTGMSKPDHNTINRFRGHRLQKTLQPIFTQVVLLLCEEGLLSLKDLYTDGTKIEANANRYTFVWGKAIKTSKERIKQQLDELWKYAQSVSACEWDDTDPSGFKKIDKETVTATVDKINAALRDKPVSKEVRQKLNYARKHWPAVLDKYEQQEKVLGTGRNSYSKTDPDATFMRMKEDHMRNGQLKPGYNLQISTNHQYIASYSIHQNLADINTLIPHVQQHIKAVGIKPNNITADAGYGSEQNYQWLEKRRITAYVKHARFDRNQRKQQRDKNPYGVDKFRYDEQTGRYNCPAGKPMKKIDREVKTNKTKSGIAQTLTYYQAKDCARCPLRKLCHPQPGNRIIEVNHNLNRLRQQADKRLLTKRGIQKRKQRCFDTEPVFANIKYNHHFKRFMLRGIDKVMVETGLLALAHNLRKKAA*