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berkeley_reactor_200306_planktonic_scaffold_28349

Search features with annotation key words

Displaying items 61-90 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_28349_61
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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73158..73832
DNA (675bp) protein (225aa)
GntR domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E958_9MICO
GntR domain protein {ECO:0000313|EMBL:EIC06538.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
GntR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_28349_62
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74020..74733
DNA (714bp) protein (238aa)
Regulatory protein GntR HTH n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E955_9MICO
Regulatory protein GntR HTH {ECO:0000313|EMBL:EIC06535.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_28349_trna_4
unknown

Not on your lists

comp(74874..74957)
DNA (84bp)
transferRNA Leu
berkeley_reactor_200306_planktonic_scaffold_28349_63
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75199..75930
DNA (732bp) protein (244aa)
Forkhead-associated protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E954_9MICO
Phosphopeptide-binding protein {ECO:0000313|EMBL:KIC57988.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
FHA domain
berkeley_reactor_200306_planktonic_scaffold_28349_64
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75927..76469
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUP2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57987.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
FHA domain
berkeley_reactor_200306_planktonic_scaffold_28349_65
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76480..77718
DNA (1239bp) protein (413aa)
Protein phosphatase 2C-like protein n=2 Tax=Microbacterium RepID=H8E952_9MICO
Protein phosphatase 2C-like protein {ECO:0000313|EMBL:EIC06532.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
serine/threonine protein phosphatase
berkeley_reactor_200306_planktonic_scaffold_28349_66
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77715..79106
DNA (1392bp) protein (464aa)
Cell cycle protein n=2 Tax=Microbacterium RepID=H8E951_9MICO
Cell cycle protein {ECO:0000313|EMBL:EIC06531.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ftsW; bacterial cell division membrane protein
berkeley_reactor_200306_planktonic_scaffold_28349_67
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79103..80563
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGD6_9MICO
Cell division protein FtsI {ECO:0000313|EMBL:KIC57984.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
cell division protein FtsI/penicillin-binding protein 2
berkeley_reactor_200306_planktonic_scaffold_28349_68
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80560..82284
DNA (1725bp) protein (575aa)
Serine/threonine protein kinase-related protein n=2 Tax=Microbacterium RepID=H8E949_9MICO
Serine/threonine protein kinase {ECO:0000313|EMBL:KIC57983.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
pknA; serine/threonine protein kinase
berkeley_reactor_200306_planktonic_scaffold_28349_69
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82883..84085
DNA (1203bp) protein (401aa)
Serine/threonine protein kinase-related protein n=2 Tax=Microbacterium RepID=H8E948_9MICO
Serine/threonine protein kinase {ECO:0000313|EMBL:KIC57982.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
serine/threonine protein kinase
berkeley_reactor_200306_planktonic_scaffold_28349_70
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(84102..84737)
DNA (636bp) protein (212aa)
Para-aminobenzoate synthase {ECO:0000313|EMBL:EXJ52096.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EXJ52096.1};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E947_9MICO
anthranilate synthase
berkeley_reactor_200306_planktonic_scaffold_28349_71
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84730..84888)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E946_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85834.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_72
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84888..85856)
DNA (969bp) protein (323aa)
Peptidase C60 sortase A and B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9D1_9MICO
Peptidase C60 sortase A and B {ECO:0000313|EMBL:EIC06525.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sortase
berkeley_reactor_200306_planktonic_scaffold_28349_73
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

85891..86130
DNA (240bp) protein (80aa)
Cell division protein CrgA n=2 Tax=Microbacterium RepID=H8E9D0_9MICO
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_74
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86278..87120)
DNA (843bp) protein (281aa)
Rhomboid family protein n=2 Tax=Microbacterium RepID=H8E9C9_9MICO
Rhomboid family protein {ECO:0000313|EMBL:EIC06523.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_75
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87140..87706)
DNA (567bp) protein (189aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Microbacterium RepID=H8E9C8_9MICO
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
berkeley_reactor_200306_planktonic_scaffold_28349_76
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87789..88358
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGE6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85840.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
superfamily II DNA/RNA helicase, SNF2 family
berkeley_reactor_200306_planktonic_scaffold_28349_77
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88472..88954
DNA (483bp) protein (161aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9C6_9MICO
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:EIC06520.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_78
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88938..89375)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUQ4_9MICO
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KIC57974.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ADP-ribose pyrophosphatase
berkeley_reactor_200306_planktonic_scaffold_28349_79
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89440..91338)
DNA (1899bp) protein (633aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9J7_9MICO
berkeley_reactor_200306_planktonic_scaffold_28349_80
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91415..92269
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB62_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC57972.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
DNA-binding protein
berkeley_reactor_200306_planktonic_scaffold_28349_81
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92285..93583)
DNA (1299bp) protein (433aa)
Antimicrobial peptide ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQR7_9MICO
Antimicrobial peptide ABC transporter permease protein {ECO:0000313|EMBL:GAD35379.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_82
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93585..94277)
DNA (693bp) protein (231aa)
ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002E92C16
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYT58798.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
antimicrobial peptide ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_28349_83
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94274..95890)
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FBE287
RecG-like helicase {ECO:0000313|EMBL:GAD35377.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_84
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95891..96871)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DDEEF7
Uncharacterized protein {ECO:0000313|EMBL:KJL26382.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_85
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97014..97442)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AFB0C
Uncharacterized protein {ECO:0000313|EMBL:KEP75351.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_trna_3
unknown

Not on your lists

comp(97496..97568)
DNA (73bp)
transferRNA Ala
berkeley_reactor_200306_planktonic_scaffold_28349_trna_2
unknown

Not on your lists

comp(97582..97655)
DNA (74bp)
transferRNA Ile
berkeley_reactor_200306_planktonic_scaffold_28349_86
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97725..98126)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9C1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06515.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_28349_87
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(98123..100699)
DNA (2577bp) protein (859aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
DNA gyrase subunit A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUR0_9MICO
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
Displaying items 61-90 of 182 in total

View Taxonomy