ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_28349_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(16123..17010)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type glycine betaine transport, periplasmic subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9G3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 298.0
  • Bit_score: 544
  • Evalue 4.10e-152
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:EXJ51454.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 296.0
  • Bit_score: 548
  • Evalue 4.00e-153
glycine betaine ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 295.0
  • Bit_score: 373
  • Evalue 4.60e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGAAGAACACCAGGAGCATTCTGGGCGGCATCGCCCTGACCGCGGCGACCGCGCTCGCCCTGAGCGGATGCGCCGGAGGCGCCGGCGGATCCGCCTCCGACCCGAAGTCGATCGAGATCGCCGTGTTCAACGGGTGGGACGAAGGCATCGCCGCGTCGTACCTGTGGCAGTCGATCCTCGAGGACAAGGGCTACGACGTGACGCTCACGTACGCCGACGTCGCGCCGGTGTACCAGGGGCTCGCCCGCGGCGACTTCGACCTCGTCCTCGACACCTGGCTGCCCACGACCCACGCCGACTACATGGAGCGCTACGGCGACAAGGTCGAGGACCTCGGCGCCTGGAACGACGACGCCCGGCTCACCATCGCCGTGAACGCGGATGCGCCGATCGACTCGCTCGACGAGCTCGCCGCGGCATCCGACCAGTTCGGCGGCCGGATCATCGGCATCGAGCCCGGATCCGGACTCATGCGCATCACCGGCGACGACGTCGTGCCGGGCTACGGGCTGGACGGCCTGCAGCTCGTCGAGTCGTCGACGCCCGCCATGCTCGCCGAGCTGAAGAAGGCGACGGATGCCGGGCAGAACATCGCCGTCACCCTGTGGCGGCCGCACTGGGCGTACAACGCGTTCCCGGTGAAGGATCTCGCCGACCCGAAGGGACTGCTGGGGGATGCCGAGAGCATCCACTCGGTGGCCGCGACCTCGTTCGCGCAGGACCACCCCGAGGTGCACGGCTGGATCTCGGGCTTCTCGATGCCGGGCGACAAGCTCGCCTCGCTCGAGGACGCCATGTTCAACCAGTACAGCGGCGACGACTACGGCCCCGTCGTGAAGCAGTGGATCGCCGACAACCAGGAATGGGTCGACGGCCTCACCGCGTAA
PROTEIN sequence
Length: 296
MKNTRSILGGIALTAATALALSGCAGGAGGSASDPKSIEIAVFNGWDEGIAASYLWQSILEDKGYDVTLTYADVAPVYQGLARGDFDLVLDTWLPTTHADYMERYGDKVEDLGAWNDDARLTIAVNADAPIDSLDELAAASDQFGGRIIGIEPGSGLMRITGDDVVPGYGLDGLQLVESSTPAMLAELKKATDAGQNIAVTLWRPHWAYNAFPVKDLADPKGLLGDAESIHSVAATSFAQDHPEVHGWISGFSMPGDKLASLEDAMFNQYSGDDYGPVVKQWIADNQEWVDGLTA*