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berkeley_reactor_200306_planktonic_scaffold_28349_141

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(156008..156613)

Top 3 Functional Annotations

Value Algorithm Source
Tetracyclin repressor domain protein n=21 Tax=Mycobacterium abscessus RepID=R4UD36_MYCAB similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 191.0
  • Bit_score: 166
  • Evalue 1.60e-38
Transcriptional regulator, TetR-family similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 200.0
  • Bit_score: 187
  • Evalue 3.20e-45
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:AHW63576.1}; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum AJ 3170.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 200.0
  • Bit_score: 187
  • Evalue 1.60e-44

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Taxonomy

Corynebacterium glyciniphilum → Corynebacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGGCCGACCGACTATCCCGCCGCGACGTCATCCACGCCGCCTTGGCCCTGCTCGATCGCGGCGGGGCGGACGCCATCACCCTCCGTGGGATCGCCCGACATCTCGACGTTCACCTCAACTCGGTGTCGCTGCAGGTGGGGAGCAAAGCGCGCCTCTTCGACCTGATGGCAGACGCCATTCTCGGCGAGCTCTCCTTCGACGACCTCCCACACCCGCCGATCGACCGGGTCAAAGAGATCTTCCGCCGCTACCGCCAGGTCCTTCTGAACCACCGCGACGGCGCACATCTCGTCTCGGGTACGAGGGTCTCCGAAACCAACACCCTGCGGCTAGGGGAGGCGGTGATTGCCGCGCTGCTCGATGCCGGCGTCGACCCCGACCTCGCCGTCACCACCTTCTGGAGCCTCAACTACCTCGTGGTCGGACTCGTCCACGAAGAACAGACCACCCCCGAGGACGGCGCCCACCGCTTCGAGCAGGAACTCGCCGCACATTCGTTCCCCGCACTCACCAGCGTCCGCGATCTCTTCCTCGACGACAACGCCGCCGCACACCTTGAATTCGGCATGGACGCGCTCCTGCACCGCGCCCGCCACCTCGACTGA
PROTEIN sequence
Length: 202
VADRLSRRDVIHAALALLDRGGADAITLRGIARHLDVHLNSVSLQVGSKARLFDLMADAILGELSFDDLPHPPIDRVKEIFRRYRQVLLNHRDGAHLVSGTRVSETNTLRLGEAVIAALLDAGVDPDLAVTTFWSLNYLVVGLVHEEQTTPEDGAHRFEQELAAHSFPALTSVRDLFLDDNAAAHLEFGMDALLHRARHLD*