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berkeley_reactor_200306_planktonic_scaffold_28349_162

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 177232..179649

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein (Fragment) n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9Z7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 701.0
  • Bit_score: 780
  • Evalue 9.20e-223
Bacterial regulatory helix-turn-helix protein, lysR family {ECO:0000313|EMBL:KJL37229.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 806.0
  • Bit_score: 1514
  • Evalue 0.0
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 781.0
  • Bit_score: 279
  • Evalue 1.90e-72

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2418
ATGAGCGAGACGGCCGGTGCCGTGCGCGTCCTTCCGTTCCGGGTCCGCCCCTTGCCGGATGAGCCGTTCGACTCCTGGCTGGAGGCCTCGGCGGCCGCGAACCGCGCGACTGTCGCGGAGATGGCGTGCGCGCTCGGCCTGGTGGAGCAGGAGGGCGGCAGGGCGGTGTCAGCGACATCGTGGATGGCCGCGCAGTGGGCGACCGAGCTCACCGATGAGCAGGCGTCCCGGCTGGAGCGGTCGACGGGGATCCCGGCGGCGCAGTTCCAGGAGATGACGCGGATGCGGTTCGCACGCCACGCGATCCGCTACACCCGGCAGGGACGGATCAGCTTCCGCTGCCCCGTCGGCGGGATGGCGGGACGGTACTGCCCCGAATGCCTGGCGGACTCCGGAGGCAGGTGGCGGATGTCGTGGCAGTTCCCATTCACCTTCGCGTGCGTCAGACACCGCCGCATCCTCGCCGACAACTGCCCGGTGTGCCACAAGCCACCGCGTCACACCGGGCACCCGCTCGCCGGGATCCCACATCCCGGGCACTGCCACAATCCCGTCGCCGGTGCCGGGACGGGCCCGATCGCGAGCCGCTGCCGCGGCGACCTCACCGCGCATCCCGAACGCATCGCCGCACCCGACCCGGCGCTCCACGCACAGCGCCGAATGATGCAGATCCTCTCCACCGGCGAGGGCCGGTTCGGGATCTATGCGGACGCCCCGCAACCCGCGATCACCGTCCTCGAAGACATCCGTCTCCTCACCCGCGCCGCAGGAGTTACGCTCTGCGATGGCGGCGACCTCGACATGCCAGAGCTGGAAACGGACCTCCTCGCGGCGGTGCCTCGAGACAAGCATGAGTGGACGTGGGCGGGACCGCCCACAGCGGCCGGCGGCGCGGTCGGTACGACGATCGCGATCGCCGCACTCGAAGACCCCGACCGTGCGGTTCGGCTGCTGGCTGGGCGCCTCGCGGTGAGCACGTCGTACACCGGTCAGACGCCGCAGCTGCAGCGACTGATCGCCGCGTCCCTCGGACGCACCCGACGACCGACGCTGTTCCTACAAGCTGCGCCAGCCTCGGACGTAAACCCGGAAGAGCGGGCACGGAAGGTGCCCGCACAACTCTGGGATGAATGGACGAACGCGCTCACCCCACGCCGCATCAACGGCGACGTCGCCGCCTCCGCGCTGGCCGCGGCCGTCGTGTTCACCGGCACACGGCTGACCCACTCCGCTGCCCTCGCCCTCCTGGACTCGACGGCGCCCATTCGTCAGGTCACTCATGTGATGCGCGAGTTCGGGAGGCCGGGCGCGGAGACGCCCGCCCTCGCGGCGATCCTCAACCTCGCCGCCTACCTCGACAGCCACGAGACACCGATCGACTACGCACGCCGCCGCAGACTCGACTGCACTGAACTCCTTCCCGAAGAGGAATGGCAGCAGCTGTGCGCCCGACTGAATGTCCAACCCGGCTCCGGCGCCCGACACCGCCATGCGCGCGCCCACCTCTACCGGGCCATCACCGGCAACTCGATGCGACGCGCACCGGAAGCATGGGACGCGGCCGGGATATCTCCGCGGACGGTCACGACGTTCACGAAGACGCTGCCGGACACCGTGCGCCGCGAGCTGAACGATATCGGCCGCGCCTTCCTGCTCCGCCGAGGGATCGACGAGCCACTCAGCTGGGCGCCCCCGCTGTCGACGCACATCGAACCCGCCGTCCGCAGCGACCCCGTCGGTGAGTGGGCGACGGCCAGACCCGTCCGTGGCGCACTCGACACACCATCTCGCAGCCGCGAACTCATCGCCCAATACGGTGAGGGCGCGACCACCTATGAGCTCGCACGGCGGACGGGAGTATCGCGGCAGACGGTGTCGCGTGTGCTCGCCGACGGCAACAGCACCCTCCGCCGCGGACGGCCCACCACGTTCGTCATCGACGAGGCTTGGCTGCGCGAGCGGTACGAGAAGGAAGGGATGACGCTGCGACAGATCGCGGCGCTCGTCGGCTGCAGCGCTCCCACGATCGCGCACCGCATCCAAGCGGCAGGCATCACGATGCGACCCGGCCCACACGACCGCACCCCTCACCCACTGGCCGGCCGGTCACGGCTCCTCCAGCGCGCCCTCGTCGGCCGCCACCCCATCGAACGCGCGCGCCGATTCCTCATCGCCACACAGCACGACAACGTGCGCGCCGCCGCGGCGACCATCCGCACGACCCAAAGCTCACTGAGCGCCCAGCTCGCAAGCCTCGGCGCCGACGTCGGCGGGGGCCTGTTCGTTGCCGCGGCACGCAACAGGCCGATGCGCCTCACCCCACTCGGCGAACGGCTCGCTCGCGAGCTCCATCGCGCCCTCGCCGCCGACCCCCATACCCAGACCACATCACCTACCGAAGAGAAGAAGGCATCATGA
PROTEIN sequence
Length: 806
MSETAGAVRVLPFRVRPLPDEPFDSWLEASAAANRATVAEMACALGLVEQEGGRAVSATSWMAAQWATELTDEQASRLERSTGIPAAQFQEMTRMRFARHAIRYTRQGRISFRCPVGGMAGRYCPECLADSGGRWRMSWQFPFTFACVRHRRILADNCPVCHKPPRHTGHPLAGIPHPGHCHNPVAGAGTGPIASRCRGDLTAHPERIAAPDPALHAQRRMMQILSTGEGRFGIYADAPQPAITVLEDIRLLTRAAGVTLCDGGDLDMPELETDLLAAVPRDKHEWTWAGPPTAAGGAVGTTIAIAALEDPDRAVRLLAGRLAVSTSYTGQTPQLQRLIAASLGRTRRPTLFLQAAPASDVNPEERARKVPAQLWDEWTNALTPRRINGDVAASALAAAVVFTGTRLTHSAALALLDSTAPIRQVTHVMREFGRPGAETPALAAILNLAAYLDSHETPIDYARRRRLDCTELLPEEEWQQLCARLNVQPGSGARHRHARAHLYRAITGNSMRRAPEAWDAAGISPRTVTTFTKTLPDTVRRELNDIGRAFLLRRGIDEPLSWAPPLSTHIEPAVRSDPVGEWATARPVRGALDTPSRSRELIAQYGEGATTYELARRTGVSRQTVSRVLADGNSTLRRGRPTTFVIDEAWLRERYEKEGMTLRQIAALVGCSAPTIAHRIQAAGITMRPGPHDRTPHPLAGRSRLLQRALVGRHPIERARRFLIATQHDNVRAAAATIRTTQSSLSAQLASLGADVGGGLFVAAARNRPMRLTPLGERLARELHRALAADPHTQTTSPTEEKKAS*