ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_33119_95

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(106138..107238)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator (EC:5.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 358.0
  • Bit_score: 442
  • Evalue 7.70e-122
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378B953 similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 355.0
  • Bit_score: 515
  • Evalue 4.30e-143
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 367.0
  • Bit_score: 517
  • Evalue 9.30e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_10KDA_Microbacterium_68_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGGCCCGCGTACGCATCTCCGACGTGGCGGCAGCGGCCGGTGTGTCGGTCACGACGGTCTCGCTCGTGCTGAACGACGTCGAGTCGCGGATCTCGCAGGAGACACGAGACCGCGTGCGCGCCGCCGCCGCCGCGGTCGGCTACGCGCCGAGCGCCCTCGCGCGCGGCCTCCGCCAGCAGCGCACCAAGACCGTCGGGCTCATCTCCGACCAGATCGCCACCACGCCCTTCGCCGGCCGCATGCTCGCCGGTGCGCAGGACGTCGCCCGCGCGAACGAACACCTCGTCTTCCTCGTCGACACGGGATCGGACGCCGCGGTGGAGGACGCCGCGATCCGGGCCCTCACCGCGCAGCAGGTCGACGCGCTGATCTACGCGGCGATGTGGCACCGCATCGTCCCGGCCGACGTGAAGCTGCCCGCCGACACGGTGTTGCTGGACTGCCGTCCGGCGGACGGCGTGACGGGCTTTCCCAGCGTCGTGCCCGACGACCGCGCCGGCGGCGCCGCGGCGACCCGCGAGCTCGTCGCGGCGGGCCACACGCGCATCGCGTACATCGACACCGACGAGGACCCGGGTCGTCCCATCGCCGCGGATCTCCGCCTCGAGGGCTATCGCGAGGTGCTCGCGGCATCCGGGATCGTCGTCGACGACGAGCTGCACGTGCACGGGGAGACCTCGCACCGCGGCGGGCGGGGCGCCGCCGAGCGCCTGCTCGATCTCCCGTCGGAGCGCCGCCCGACGGCGATCTTCTGCTTCAACGACCGCATGGCCACGGGGGCCTACACCGCGATCCACGCACGCGGGCTGCGCATCCCCGAGGACATCTCGATCATCGGCTACGACGACCAGCAGTTCATCGCCGCCGAGCAAGACCCCCCGCTGACCACCGTCGCGCTGCCCCACTACGAGATGGGCCGCTGGGCGATGGAGGTCGCACTCGGCATCCGTGAGGGGGGAGAGGATGCCGTTCACCAGATGGAGTGTCCCGTCGTCCGACGAGACTCCGTGGGCCCGCCGCCGGCGCATGTCGCCAAACCGAACCGGCGACGGACCTCACAACACACCGAGCGGTCGCTTTCGGCGACCCCCGATCGGTGA
PROTEIN sequence
Length: 367
MARVRISDVAAAAGVSVTTVSLVLNDVESRISQETRDRVRAAAAAVGYAPSALARGLRQQRTKTVGLISDQIATTPFAGRMLAGAQDVARANEHLVFLVDTGSDAAVEDAAIRALTAQQVDALIYAAMWHRIVPADVKLPADTVLLDCRPADGVTGFPSVVPDDRAGGAAATRELVAAGHTRIAYIDTDEDPGRPIAADLRLEGYREVLAASGIVVDDELHVHGETSHRGGRGAAERLLDLPSERRPTAIFCFNDRMATGAYTAIHARGLRIPEDISIIGYDDQQFIAAEQDPPLTTVALPHYEMGRWAMEVALGIREGGEDAVHQMECPVVRRDSVGPPPAHVAKPNRRRTSQHTERSLSATPDR*