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berkeley_reactor_200306_planktonic_scaffold_33119_119

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(133444..134109)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3CB23 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 217.0
  • Bit_score: 297
  • Evalue 8.50e-78
Putative HMP/thiamine permease protein YkoE {ECO:0000313|EMBL:KJL36511.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 205.0
  • Bit_score: 307
  • Evalue 1.50e-80
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 196.0
  • Bit_score: 232
  • Evalue 7.30e-59

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCACGCGTCTGCGTCCCCGTCCACCGTCTCGTCGGATGCCGCGGCATCCCGTTCCGCCGCGCGCACCGGCCGCCTGCGCTGGCGCGTCGTCGACATCGTCGTCGCCAGCGTCATCGGTGTGGCCGCCGGTGTCGTCTTCTGGCTGTGGGGCCAGGCGTGGACGCCGCTGAGCAGCATCCTCGCGTTCGCACCGGGGCTGGAGGGGCTGCTCTCCGGCGGGTGGCTGTTCGCCGGTGTGCTCGGTGGTCTCATCATCCGCAAGCCCGGCGCCGCGCTGTACACCGAGGTCGTCGCCGCGGTGGTGTCGATGGCCGTCGGCACGCAGTGGGGCTTCCTCACGCTGGTCTGGGGCGTCGTGCAGGGCATCGGCGCCGAGCTCGGGTTCGCGCTGTTCGCGTACGCGAACTACCGTCTGATCGCGGCGCTCACCTCGGGCGCCCTCGCCGGCCTCGCCGTGGCCCTTCTCGACACCAACTTCTCCTCGATCGCCGCCTACGAGTTCGGGCCGCGAGTGATCTACTTCGGTGCCGCCGTCGTCTCCGGCATCCTCGTCGCGGGTCTGGTGTCGTGGCTCATCGCCCGTGCCCTGGCCGCCACGGGCGCGCTGGACCGGTTCGCGGCGGGTCGAGAGGCACGTATCGCGGACGCGCCCGACGCGGCGTGA
PROTEIN sequence
Length: 222
MHASASPSTVSSDAAASRSAARTGRLRWRVVDIVVASVIGVAAGVVFWLWGQAWTPLSSILAFAPGLEGLLSGGWLFAGVLGGLIIRKPGAALYTEVVAAVVSMAVGTQWGFLTLVWGVVQGIGAELGFALFAYANYRLIAALTSGALAGLAVALLDTNFSSIAAYEFGPRVIYFGAAVVSGILVAGLVSWLIARALAATGALDRFAAGREARIADAPDAA*