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berkeley_reactor_200306_planktonic_scaffold_340111_189

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(194306..195718)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 470.0
  • Bit_score: 802
  • Evalue 3.20e-229
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2L3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 470.0
  • Bit_score: 802
  • Evalue 2.30e-229
murF; UDP-N-acetylmuramyl pentapeptide synthase similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 470.0
  • Bit_score: 664
  • Evalue 1.60e-188

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGATCCGGATGACGCTGGCCGAGGTGGCCGCCGCCGTGACGGGAACTCTGCACCCGGCACACCACGACACTCCCGAGACGTTCGTCGACGGCGACGTCGACACCGACTCCCGCATGATCGGGGCGGGTGACATCTTCGTCGCGAAACCCGGCGAGGTCACCGACGGCCACCACTTCGTCGAGGCCGCCGTCGAGGCCGGTGCGGTGCTGGCGATCGTGGAGCGACGCGTCGACGCGCCCGTCAGCCAGATCGTCGTCCCGGATGCCGTCGCGGCCCTCTCCGACCTCGCGAGGGTGGTCGTGGCCTCCGTCCGCGCGGGCGGGGAGCTGCGGATCGTCGGCATCACCGGCTCGAACGGCAAGACCACCACCAAGAACATGCTGGCGCGCATCCTGCAGGACGAGGGCGACACCGTCGCGCCGCGCGGCTCGTTCAACAACGAGGTCGGCGCGCCGCTGACGATGCTGCGCGTCCGCGCGCAGACCCGCTTCCTCGTCAGCGAGTTCGGCGCCTCCGGACCCGGCGAGATCGCGCGTCTGGCCGGTCTGGTCTCCCCGGACGTGGGTGTCGTGCTGATGGTGGGCCTGGCCCACGCGGGCGGCTTCGGCGGCGTCGAGGAGACACTGAAGGCGAAGACCGAGCTGGTCGAGGCGGTCCGCCCCGGCGGTGTCGCGGTGCTGAACGCGGACGACGCTCGCGTCGTCACGATGGCGGCCGTCGCCGCGTCGCGCGACGTCGAGGTCCGCTGGTTCGGTCGCGGCGCCGCCGCGGAGATCCGGGCCGAGGACGTCGAGGTCACGGCCGCCGGCACGACGTGCACGATCGTGGCCGGGGACGAGCGCTTCCCGCTCCGGCTCCGCGTGCTCGGCGAGCACCACGTCATGAACGCGCTGGCCGCGCTGACGGCCGCCCGCGAGCTCGGCGTGCCGCTGCCGTCCGCCATCGCGCGGTTGGAGACGCTCGAGATCGCGGAGCGCTGGCGGATGCAGCCGCTCGGCTCCGACCGCGTGCGCATCATCAACGACGCCTACAACGCGAGCCCCGACTCGATGGCGGCCGCGCTGCGCACGCTCGCGCAGATCGCGGGCCCGGGCGAGCGGAAGGTCGCCGTCCTCGGTGCCATGAGCGAGCTCGGCGAGTTCGCCGGCGAGGAGCACGACCGCGTCGGTCTGCTCGCCGTGCGGCTGCGCATCGAGCGCATCGTCGTGGTGGGGCGCGACGCGCGCCGCCTCTTCCTCGCCGCCGTCGGCGAGGGGTCGTGGGACGGGGAGGCCGTCTTCTTCGAGACCGCCGACGAGGCGTTCGACTACCTCCTCCACGAGCTGCGCGACGGCGATCGCGTGCTGGTGAAGTCGTCGAACTCCGCCGGGCTCCGGCACCTCGGCGATCGTCTGGGAGAATCGTTCTCGTGA
PROTEIN sequence
Length: 471
MIRMTLAEVAAAVTGTLHPAHHDTPETFVDGDVDTDSRMIGAGDIFVAKPGEVTDGHHFVEAAVEAGAVLAIVERRVDAPVSQIVVPDAVAALSDLARVVVASVRAGGELRIVGITGSNGKTTTKNMLARILQDEGDTVAPRGSFNNEVGAPLTMLRVRAQTRFLVSEFGASGPGEIARLAGLVSPDVGVVLMVGLAHAGGFGGVEETLKAKTELVEAVRPGGVAVLNADDARVVTMAAVAASRDVEVRWFGRGAAAEIRAEDVEVTAAGTTCTIVAGDERFPLRLRVLGEHHVMNALAALTAARELGVPLPSAIARLETLEIAERWRMQPLGSDRVRIINDAYNASPDSMAAALRTLAQIAGPGERKVAVLGAMSELGEFAGEEHDRVGLLAVRLRIERIVVVGRDARRLFLAAVGEGSWDGEAVFFETADEAFDYLLHELRDGDRVLVKSSNSAGLRHLGDRLGESFS*