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berkeley_reactor_200306_planktonic_scaffold_340111_203

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(210243..210734)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 163.0
  • Bit_score: 311
  • Evalue 5.90e-82
Peptide deformylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AN40_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 163.0
  • Bit_score: 311
  • Evalue 4.20e-82
N-formylmethionyl-tRNA deformylase similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 163.0
  • Bit_score: 280
  • Evalue 2.20e-73

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCCGTCCGGCCGATCCGCCTGTTCGGCGACCCGGTGCTGCGCGCACCCAGCGCGCCCATCGAGGTCGTCGACGACGGCATCCGCGGCCTCGTGCAGGACCTGCTCGACACCGTGGAGCTGCCGGGGCGGGCCGGTGTGGCGGCGCCGCAGATCGGCGTGGGGCTGCGCGCGTTCAGCTACAACATCGACGGCGACATCGGATACGTGCTCAATCCGGTGCTCACGGACGTCGCCGGCGAGCCGCAGCTCGTCGGCGAGGGCTGCCTGTCGGTGCCCGATCTGTGGCACGACACGCTGCGCTACCCCTGGGCCCGCGTCGTGGGCATGGACCTCGACGGTGCCGAGCTCGTCCTCGAGGGGGAGGGGCTGATGGCCCAGGCGCTGCAGCACGAGACCGATCATCTCGACGGGATGCTCTACATCTCGCGTCTGAGTCCCGAAGAGCGCAAGATCGCGATGCGCCGGATCCGCGAGTCGAACTGGTTCTGA
PROTEIN sequence
Length: 164
MAVRPIRLFGDPVLRAPSAPIEVVDDGIRGLVQDLLDTVELPGRAGVAAPQIGVGLRAFSYNIDGDIGYVLNPVLTDVAGEPQLVGEGCLSVPDLWHDTLRYPWARVVGMDLDGAELVLEGEGLMAQALQHETDHLDGMLYISRLSPEERKIAMRRIRESNWF*