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SCN_reactora_scaffold_57229_31

Organism: SCN_bioreactor_inoc_reactora_Bacteroidetes_38_10

near complete RP 41 / 55 BSCG 51 / 51 ASCG 10 / 38
Location: comp(37224..37790)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2AMD9_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 188.0
  • Bit_score: 133
  • Evalue 1.40e-28
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS18500.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 188.0
  • Bit_score: 133
  • Evalue 1.90e-28
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 168.0
  • Bit_score: 113
  • Evalue 5.50e-23

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGAATTATCAAAATGAATAGAAGTGAAAATTCTGATTATAGCGTATATGAAGGCTTATTTATACAGAATTATGAATCTTTATGTTCATTCATATATTCTTACGTTCCTGATATTGATGCTGCAAAAGATATAGTACAGGATACATTTGTGGCGTTGTGGCAAAATAAGGATAAGTATCAACTAACAAATACTTTACTATATGCTATAGCAAAAAATAAAGCTATAGATTATATCAGAGCTAACCATCAAACAAAGATATTAAAAGGAGTTCCTGTCGATATCTTTACAGACCTGCTCCAGACAAATCAGGACGAAGAATCAGATCTCAGAGAAATAACTGAAGAGATCTGGAAATATGTAGAAACATTGCCTCCTCAATGTAAAAGAATATTTATATTAAGTCGTTTCAGTAATCTTAAAAACAAAGAAATAGCAGAGCAATTGGAAATTTCAGTGAAAGCTGTGGAAAAACAAATAACTAAGGCTTTAAGCTCGATTCGTACATTCCTACTGGAAAAAGGAATGTTTCTGCTTATTATTCTTATTTCAACATTTCTAAGATAA
PROTEIN sequence
Length: 189
MGIIKMNRSENSDYSVYEGLFIQNYESLCSFIYSYVPDIDAAKDIVQDTFVALWQNKDKYQLTNTLLYAIAKNKAIDYIRANHQTKILKGVPVDIFTDLLQTNQDEESDLREITEEIWKYVETLPPQCKRIFILSRFSNLKNKEIAEQLEISVKAVEKQITKALSSIRTFLLEKGMFLLIILISTFLR*