ggKbase home page

scn_reactorb_scaffold_5360_23

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(23713..26166)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039568C4 similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 825.0
  • Bit_score: 773
  • Evalue 1.10e-220
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EMR12199.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 810.0
  • Bit_score: 663
  • Evalue 2.30e-187
TonB-dependent siderophore receptor similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 806.0
  • Bit_score: 633
  • Evalue 5.20e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylophaga lonarensis → Methylophaga → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2454
ATGAACCAGACCCGGGCGCTGCGCCGCCATCTCCGCCACCTGTTTTCCCCTTCCGCCCTCGCGCGGGCCATCGCCCGGCCGGGCCTGGGTGCCCTGGCCGCCGGGGCCTTGCTGGCCGTGCCCGTGGCGGCGCTGGCCCAGCCGGGCGCGGCGCCCGTGCGCGGCTACGACATACCGGCGGGGCCGCTCGACGAGGCGCTCGGCCGCTTCGGCAGCGAGGCCGGCATCCTGCTGCCGTTCAGCCCCGCCGTCACCGAGGGGCTGCGCAGCCCGGGGCTGCGCGGCAGCTATTCGGTCGAGGCGGGGCTGGCCGCGCTGCTGGCCGGCACCGGCCTGCAGGCGGTGCGCCAGGCCAATGGCAGCTATGCGCTGGCGCCGGCGGCGCGGGCCGATGCCGGTGGCGGCGCTGCCACGCTGCAGACGGTCAAGGTCACGGCCCAGGGCGTGCGGGACGGCACCACCGAAGGGACGGGCTCCTACCGGGCCGGGCATACCGCCACGGCCACCAGGCTGGCCCTGTCGCCCCGCGAGACACCGCAGACGGTTACCGTGGTGACGCGCCAGCAGATGGACGACTTCGGCCTGAACTCGGTGGATGACGCGCTCAAGGCCACCAGCGGGGTCTTCGTCTACGAGCGCGGCAACCTGGGCAGCTACTACTTCAGCCGGGGCTTCTACCTGCAGTCGCAGTACGACGGCATGGCCAACCCCATCGGCATCAGCAACGACAACAAGAGTCCGATCGTCGACAGCGCCTTCCTGGACCGCATGGAGGTGCTCCAGGGCGCGTCCGGACTGCTCAGCGGTGCGGGCTATCCCGGCGGCACGATCAACCTGGTGCGCAAGCGGCCGACGCAGGATTTCCAGGCGCAGGTGGAAGTCCAGGCGGGCTCGTGGAACCAGAAGCGCGCCATGGCCGACGTGTCGGGCGCGCTCACGGCATCGGGCCAGGTGCGCGGCCGCCTCGTGGCGCTGGTGGACTACCGGGATGCGTTCGTGGACCATGCCTTCAACCACCGGCGGGGGCTGTATGGGGCCATCGATGCGGATCTGACGCCCACGACCCTGGTCAGCGCCAGCGTCCAGTACCAGAAGGACCAGGGGCGCGACCACTCCGGGGTGCCCTATGGCGCCGACGGCAGCGACATGGGCTTCGACCGCTCGGCGTTCTTCGGCAATCCGCGCAGCCGCAACGACAAGGACTACGCGCTCTACACCCTGGGCCTGGAGCAGCAGCTCTCGTCCGGCTGGCGCATGAAGGCAGCGTACGACCATGGGCGCGCCAGCACCCGGCAGCCCAACGACAGCTGGCTGTCGGGCTCCCTGGACCGTGCCACGGGCAACGGGCTCTCGCTCTACCAGGCACGCCTGTTCGATCGGGAGGTCAAAGCCAACACCGCGGACGTGTTCGTCTCCGGCCCGGCGTCGTTCTGGGGCCGCACGCACGAGTTCGTGCTGGGGGCCAATGTTTCCAGCGCCCATGACTATGCGCAGGCGTCTGGCTACCTGCCCACGGCGATCAACGTGCTGGGGTTCGATCCGCACGCGCTGCCCGATCCGGTGGGCGGGGCGCCCTACGAGTACGGCAGCAAGACGCGCCAGAAGGGGCTCTACGGCGTGGCGCGCCTGGGCCTGACGGATGCGCTCAAGCTCATCGCCGGCACGCGCATCAGCTGGTACGAGTCCCGCAACCTCGTCAACGGCGTGGTCGACCAGAAAGAGAGCGGCGTGGTCTCGCCCTATGCCGGGCTGGTGTACGACCTGCATGCGCAGTATTCGGTCTATGCCAGCTATTCCGACATCTTCACGCCGCAAAGCCAGCGGGGTGTTGGCGGCGGCACGGTCAAGCCGGTGGTCGGGTCGAACTACGAGGTGGGAGCCAAGGGCGCCCTGCTGGGCGGCCGGCTGAACGCCACGGCGGCGCTGTTCCAGCTCGACCAGCAGAACCTGGCCCGGCAGGACGCCTCTGTCCCCTTCGACCGAAGCAACGCCTGCGGCGGCTGGTGCTACGTGGCCGACGACACGGTGCGCAGCCGGGGCGTCGACCTGGGCCTCAACGGAGAGATCCGCCCGGGCTGGAACGTGGCGGCGGGCTACACCTACGTGAACAGCCGCTATGCATCGGGCAAGCAGCAGGGCGAGCGCTACATGTCCGGCCTGCCGCGGCACAGCCTGAGCATTGCCTCGAGCCAGCGGATCGCGGGCACCGGCTGGACGCTGGGCGGCAGCGTTCGGGTCTACAGCAGCATCACCAACACCACCTACCACATCCGGCGCGGGGGCCTGGCCTTGTTCGGCGTGACGGCGAAGTACCAGCTCAGCCCCAGCACCGATGTGCACGCCGTGGTGGACAACCTGTTCGACAAGCGCTACTACGCGACCGTGCACAACCTCTGGTACTCGCCGTTCGGCGAGCCCCGCCGGTTCTCGGTGAGCCTCAGGCACCGATTCTGA
PROTEIN sequence
Length: 818
MNQTRALRRHLRHLFSPSALARAIARPGLGALAAGALLAVPVAALAQPGAAPVRGYDIPAGPLDEALGRFGSEAGILLPFSPAVTEGLRSPGLRGSYSVEAGLAALLAGTGLQAVRQANGSYALAPAARADAGGGAATLQTVKVTAQGVRDGTTEGTGSYRAGHTATATRLALSPRETPQTVTVVTRQQMDDFGLNSVDDALKATSGVFVYERGNLGSYYFSRGFYLQSQYDGMANPIGISNDNKSPIVDSAFLDRMEVLQGASGLLSGAGYPGGTINLVRKRPTQDFQAQVEVQAGSWNQKRAMADVSGALTASGQVRGRLVALVDYRDAFVDHAFNHRRGLYGAIDADLTPTTLVSASVQYQKDQGRDHSGVPYGADGSDMGFDRSAFFGNPRSRNDKDYALYTLGLEQQLSSGWRMKAAYDHGRASTRQPNDSWLSGSLDRATGNGLSLYQARLFDREVKANTADVFVSGPASFWGRTHEFVLGANVSSAHDYAQASGYLPTAINVLGFDPHALPDPVGGAPYEYGSKTRQKGLYGVARLGLTDALKLIAGTRISWYESRNLVNGVVDQKESGVVSPYAGLVYDLHAQYSVYASYSDIFTPQSQRGVGGGTVKPVVGSNYEVGAKGALLGGRLNATAALFQLDQQNLARQDASVPFDRSNACGGWCYVADDTVRSRGVDLGLNGEIRPGWNVAAGYTYVNSRYASGKQQGERYMSGLPRHSLSIASSQRIAGTGWTLGGSVRVYSSITNTTYHIRRGGLALFGVTAKYQLSPSTDVHAVVDNLFDKRYYATVHNLWYSPFGEPRRFSVSLRHRF*